RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 ITLN2Q8WWU7 325 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF40-204ENST00000555038 RNASE7Q9H1E1 156 aaKnown RBP16.87■□□□□ 0.29
ARHGEF40-204ENST00000555038 KLF12Q9Y4X4 402 aa16.87■□□□□ 0.29
ARHGEF40-204ENST00000555038 SMIM27A0A1W2PRY6 76 aa16.87■□□□□ 0.29
ARHGEF40-204ENST00000555038 K7EIM0 57 aa16.87■□□□□ 0.29
ARHGEF40-204ENST00000555038 PSG1P11464 419 aa16.87■□□□□ 0.29
ARHGEF40-204ENST00000555038 BAGE2Q86Y30 109 aa16.87■□□□□ 0.29
ARHGEF40-204ENST00000555038 OR8I2Q8N0Y5 310 aa16.87■□□□□ 0.29
ARHGEF40-204ENST00000555038 CHD8Q9HCK8 2581 aa16.87■□□□□ 0.29
ARHGEF40-204ENST00000555038 IGHV3-21A0A0B4J1V1 117 aa16.86■□□□□ 0.29
ARHGEF40-204ENST00000555038 A0A1W2PPR1 153 aa16.86■□□□□ 0.29
ARHGEF40-204ENST00000555038 NPIPB5A8MRT5 1133 aa16.86■□□□□ 0.29
ARHGEF40-204ENST00000555038 ADMP35318 185 aa16.86■□□□□ 0.29
ARHGEF40-204ENST00000555038 ZNF562Q6V9R5 426 aa16.86■□□□□ 0.29
ARHGEF40-204ENST00000555038 GBGT1Q8N5D6 347 aa16.86■□□□□ 0.29
ARHGEF40-204ENST00000555038 C5orf17Q8NAS9 161 aa16.86■□□□□ 0.29
ARHGEF40-204ENST00000555038 MRPL18Q9H0U6 180 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-204ENST00000555038 TBL2Q9Y4P3 447 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-204ENST00000555038 UBE2G1P62253 170 aa16.85■□□□□ 0.29
ARHGEF40-204ENST00000555038 RANP62826 216 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-204ENST00000555038 Q8N6K4 173 aa16.85■□□□□ 0.29
ARHGEF40-204ENST00000555038 ZNF48Q96MX3 618 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-204ENST00000555038 MRPL27Q9P0M9 148 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-204ENST00000555038 RNF24Q9Y225 148 aa16.85■□□□□ 0.29
ARHGEF40-204ENST00000555038 TRAV30A0A087WSZ9 112 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 SLC25A5P05141 298 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 RD3LP0DJH9 198 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 HOXB4P17483 251 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 CDKN1AP38936 164 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 HES1Q14469 280 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 S100A7AQ86SG5 101 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 TMEM68Q96MH6 324 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 ATG101Q9BSB4 218 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 SIRPDQ9H106 197 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 UBTD1Q9HAC8 227 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 PGPA6NDG6 321 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 LINC00587B1AMM8 73 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 IGKV1-17P01599 117 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 CBLN1P23435 193 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 LYZP61626 148 aa16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 SLC25A39Q9BZJ4 359 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-204ENST00000555038 ZNF705GA8MUZ8 300 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-204ENST00000555038 HIST1H1EP10412 219 aaKnown RBP16.83■□□□□ 0.28
ARHGEF40-204ENST00000555038 RASL11AQ6T310 242 aa16.83■□□□□ 0.28
ARHGEF40-204ENST00000555038 BLNKQ8WV28 456 aa16.83■□□□□ 0.28
ARHGEF40-204ENST00000555038 FMC1Q96HJ9 113 aa16.83■□□□□ 0.28
ARHGEF40-204ENST00000555038 RBM14Q96PK6 669 aaKnown RBP16.83■□□□□ 0.28
ARHGEF40-204ENST00000555038 ATRXP46100 2492 aa16.83■□□□□ 0.28
ARHGEF40-204ENST00000555038 IGHV2-70DA0A0C4DH43 119 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 SNURFLB1AK76 121 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 TOMM40O96008 361 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 ZFP36P26651 326 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 IER3P46695 156 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 ZNF600Q6ZNG1 722 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 ARPC1AQ92747 370 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 MBD6Q96DN6 1003 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 GRAMD2BQ96HH9 432 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 LINC00479Q96M42 142 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 OTORQ9NRC9 128 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 IZUMO1RA6ND01 250 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 GATCO43716 136 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 ESDP10768 282 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 TTC9CQ8N5M4 171 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 GPR82Q96P67 336 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 PRDM13Q9H4Q3 707 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 GSX1Q9H4S2 264 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 SERTAD4Q9NUC0 356 aa16.82■□□□□ 0.28
ARHGEF40-204ENST00000555038 Q9H3A6 140 aa16.81■□□□□ 0.28
ARHGEF40-204ENST00000555038 IGLV11-55A0A075B6I3 123 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 TMEM8BA6NDV4 472 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 HLA-DQA1P01909 254 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 AMY1AP04745 511 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 CRISP2P16562 243 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 UBE2E1P51965 193 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 Q0VG73 95 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 IGFBPL1Q8WX77 278 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 SHANK2-AS3Q9BTD1 123 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 C7orf69Q9H7B7 122 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 C1RLQ9NZP8 487 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 THYN1Q9P016 225 aa16.8■□□□□ 0.28
ARHGEF40-204ENST00000555038 GOSR1O95249 250 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 TCRAP04437 139 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 GNG5P63218 68 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 WIPF2Q8TF74 440 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 TRAV34A0A0B4J273 112 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 H3BRN7 92 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 GZMBP10144 247 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 MFAP4P55083 255 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 CDPF1Q6NVV7 123 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 TMEM136Q6ZRR5 245 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 NUDT10Q8NFP7 164 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 NUDT11Q96G61 164 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 MLST8Q9BVC4 326 aa16.79■□□□□ 0.28
ARHGEF40-204ENST00000555038 NBASA2RRP1 2371 aa16.78■□□□□ 0.28
ARHGEF40-204ENST00000555038 TRBV6-1A0A0K0K1D8 114 aa16.78■□□□□ 0.28
ARHGEF40-204ENST00000555038 A0A1W2PRD5 423 aa16.78■□□□□ 0.28
ARHGEF40-204ENST00000555038 A0A1W2PRF3 423 aa16.78■□□□□ 0.28
ARHGEF40-204ENST00000555038 A0A1W2PRM7 423 aa16.78■□□□□ 0.28
ARHGEF40-204ENST00000555038 SCGB2A1O75556 95 aa16.78■□□□□ 0.28
ARHGEF40-204ENST00000555038 TOX4O94842 621 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms