RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 RFPL3SP0C7P2 107 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 DAD1P61803 113 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 NDPQ00604 133 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 LIMS2Q7Z4I7 341 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 COL22A1Q8NFW1 1626 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-216ENST00000555002 A0A087WWL8 130 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 TMEM8BA6NDV4 472 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 OSR1Q8TAX0 266 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-216ENST00000555002 NRN1Q9NPD7 142 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 Q6AWC8 147 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 MSRB2Q9Y3D2 182 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A10PA6NDY2 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A18PA6NE21 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A16PA6NEW6 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A20PA6NIJ5 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A8PA6NJQ4 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A7PA6NKC0 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FABP5P3A8MUU1 101 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A22PA8MWA6 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A12PA8MX19 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A5PA8MXJ8 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A23PA8MXZ1 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 ZNF561-AS1K7EIQ3 104 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FCN3O75636 299 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A15PP0C7V4 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A13PP0C7W8 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A14PP0C7W9 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A24PP0C7X0 464 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 PYYP10082 97 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 C5orf47Q569G3 176 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 SPSB3Q6PJ21 355 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 DMRTC2Q8IXT2 367 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-216ENST00000555002 POC1AQ8NBT0 407 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 DANCRP0C864 163 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 CMC4P56277 68 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-216ENST00000555002 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-216ENST00000555002 NGFRP08138 427 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 GAGE2BQ13066 116 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 SAMD5Q5TGI4 173 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 BRD3OSQ6XYD6 125 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 A8MXK9 166 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 C9orf106Q8NAJ2 232 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 OVOL1O14753 267 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 TIMM23O14925 209 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 CFHR5Q9BXR6 569 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 NRXN3Q9Y4C0 1643 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 TRAV12-1A0A0B4J245 112 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 IGHV3-16A0A0C4DH30 117 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 PLA2G10O15496 165 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 CTSBP07858 339 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 RPL36AP83881 106 aaKnown RBP5.74□□□□□ -1.49
SYNE2-216ENST00000555002 TMEM91Q6ZNR0 172 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 RPL36ALQ969Q0 106 aaKnown RBP5.74□□□□□ -1.49
SYNE2-216ENST00000555002 AHDC1Q5TGY3 1603 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-216ENST00000555002 GAGE13Q4V321 117 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 PLEKHB2Q96CS7 222 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 OVOL2Q9BRP0 275 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 TMEM256Q8N2U0 113 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 SIGMAR1Q99720 223 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 TMEM133Q9H2Q1 129 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 NPIPB13A6NJU9 1138 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 NPIPB5A8MRT5 1133 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 DMRT1Q9Y5R6 373 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 SSBP2P81877 361 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-216ENST00000555002 ZNF876PQ49A33 203 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-216ENST00000555002 BHLHA9Q7RTU4 235 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 LINC00312Q9Y6C7 94 aa5.74□□□□□ -1.49
SYNE2-216ENST00000555002 TET2Q6N021 2002 aaPredicted RBP5.73□□□□□ -1.49
SYNE2-216ENST00000555002 PSG1P11464 419 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 RLFQ13129 1914 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 SERF1AO75920 110 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 TCTEX1D4Q5JR98 221 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 MUC6Q6W4X9 2439 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 IGKV1-8A0A0C4DH67 115 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 PRCDQ00LT1 54 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 ZNF660Q6AZW8 331 aaPredicted RBP5.73□□□□□ -1.49
SYNE2-216ENST00000555002 CSTL1Q9H114 145 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 LCTP09848 1927 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 GREB1LQ9C091 1923 aaPredicted RBP5.73□□□□□ -1.49
SYNE2-216ENST00000555002 TRBV5-5A0A0J9YX44 114 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 ZNF708P17019 499 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 ATP5IP56385 69 aaPredicted RBP5.73□□□□□ -1.49
SYNE2-216ENST00000555002 PVRIGQ6DKI7 326 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 CLPSL2Q6UWE3 100 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 C1QL4Q86Z23 238 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 IGLV1-36A0A0B4J1U3 117 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 RAMP3O60896 148 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 DSCR9P59020 149 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 ZNF479Q96JC4 524 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 C17orf100A8MU93 164 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 IGHV1-2P23083 117 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 TIMM21Q9BVV7 248 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 TNRC6AQ8NDV7 1962 aaKnown RBP5.73□□□□□ -1.49
SYNE2-216ENST00000555002 KIAA1549Q9HCM3 1950 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 UCP3P55916 312 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 FAM90A2PQ658T7 463 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 RASL11AQ6T310 242 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 CHKB-CPT1BH3BT56 60 aa5.73□□□□□ -1.49
SYNE2-216ENST00000555002 TIAF1O95411 115 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms