RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 MYO18BQ8IUG5 2567 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 ITPR3Q14573 2671 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 MED1Q15648 1581 aaPredicted RBP0.25□□□□□ -2.37
SCFD1-214ENST00000554819 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.25□□□□□ -2.37
SCFD1-214ENST00000554819 TGIF2-C20orf24A0A0A6YYL0 155 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 TRBV6-4A0A1B0GX49 114 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 IFNA5P01569 189 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 NKX2-5P52952 324 aaPredicted RBP0.25□□□□□ -2.37
SCFD1-214ENST00000554819 C8orf74Q6P047 294 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 PLPP5Q8NEB5 264 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 OR52R1Q8NGF1 315 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 NIT2Q9NQR4 276 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 MRPL27Q9P0M9 148 aaKnown RBP0.25□□□□□ -2.37
SCFD1-214ENST00000554819 TMEM14CQ9P0S9 112 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 HIVEP1P15822 2718 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 CHD6Q8TD26 2715 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 GCN1Q92616 2671 aaKnown RBP0.25□□□□□ -2.37
SCFD1-214ENST00000554819 USP9YO00507 2555 aaPredicted RBP0.25□□□□□ -2.37
SCFD1-214ENST00000554819 LRRK2Q5S007 2527 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 ZFYVE26Q68DK2 2539 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 CASP8AP2Q9UKL3 1982 aa0.25□□□□□ -2.37
SCFD1-214ENST00000554819 HECW1Q76N89 1606 aa0.24□□□□□ -2.37
SCFD1-214ENST00000554819 A0A087X0T9 212 aa0.24□□□□□ -2.37
SCFD1-214ENST00000554819 TRAV26-2A0A0B4J265 109 aa0.24□□□□□ -2.37
SCFD1-214ENST00000554819 OR4C46A6NHA9 309 aa0.24□□□□□ -2.37
SCFD1-214ENST00000554819 ANP32AP39687 249 aaKnown RBP0.24□□□□□ -2.37
SCFD1-214ENST00000554819 TSNQ15631 228 aaKnown RBP0.24□□□□□ -2.37
SCFD1-214ENST00000554819 KRTAP20-1Q3LI63 56 aa0.24□□□□□ -2.37
SCFD1-214ENST00000554819 CCDC90BQ9GZT6 254 aa0.24□□□□□ -2.37
SCFD1-214ENST00000554819 CYSLTR1Q9Y271 337 aa0.24□□□□□ -2.37
SCFD1-214ENST00000554819 STAB2Q8WWQ8 2551 aa0.24□□□□□ -2.37
SCFD1-214ENST00000554819 ACACBO00763 2458 aa0.24□□□□□ -2.37
SCFD1-214ENST00000554819 CACNA1EQ15878 2313 aa0.24□□□□□ -2.37
SCFD1-214ENST00000554819 HECW2Q9P2P5 1572 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 NBEAL2Q6ZNJ1 2754 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 BSNQ9UPA5 3926 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 ROBO3Q96MS0 1386 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 OR2T8A6NH00 312 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 M0R036 132 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 CCL16O15467 120 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 CHP2O43745 196 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 IFNA16P05015 189 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 SERPINA6P08185 405 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 CASP1P29466 404 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 IMPG1Q17R60 797 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 LINC00575Q6W349 94 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 OR2T10Q8NGZ9 312 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 TMEM254Q8TBM7 123 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 DDI1Q8WTU0 396 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 HIST1H2BLQ99880 126 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 VPS29Q9UBQ0 182 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 EPG5Q9HCE0 2579 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 TENM2Q9NT68 2774 aa0.23□□□□□ -2.37
SCFD1-214ENST00000554819 BIRC6Q9NR09 4857 aa0.22□□□□□ -2.37
SCFD1-214ENST00000554819 TNRC18O15417 2968 aaPredicted RBP0.22□□□□□ -2.37
SCFD1-214ENST00000554819 MYO9AB2RTY4 2548 aa0.22□□□□□ -2.37
SCFD1-214ENST00000554819 AHSA1O95433 338 aa0.22□□□□□ -2.37
SCFD1-214ENST00000554819 TTRP02766 147 aa0.22□□□□□ -2.37
SCFD1-214ENST00000554819 DEFA1P59665 94 aa0.22□□□□□ -2.37
SCFD1-214ENST00000554819 C12orf45Q8N5I9 185 aaPredicted RBP0.22□□□□□ -2.37
SCFD1-214ENST00000554819 RNF122Q9H9V4 155 aa0.22□□□□□ -2.37
SCFD1-214ENST00000554819 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
SCFD1-214ENST00000554819 POLQO75417 2590 aa0.22□□□□□ -2.37
SCFD1-214ENST00000554819 WDFY4Q6ZS81 3184 aa0.22□□□□□ -2.37
SCFD1-214ENST00000554819 AKAP13Q12802 2813 aa0.22□□□□□ -2.37
SCFD1-214ENST00000554819 RIF1Q5UIP0 2472 aaKnown RBP0.22□□□□□ -2.37
SCFD1-214ENST00000554819 TNS3Q68CZ2 1445 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 BDP1A6H8Y1 2624 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 USH2AO75445 5202 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 ZNF106Q9H2Y7 1883 aaKnown RBP0.21□□□□□ -2.38
SCFD1-214ENST00000554819 FAM236DA0A1B0GTK5 79 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 CLDN24A6NM45 220 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 KPNA3O00505 521 aaPredicted RBP0.21□□□□□ -2.38
SCFD1-214ENST00000554819 FAM236CP0DP71 79 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 IAH1Q2TAA2 248 aaPredicted RBP0.21□□□□□ -2.38
SCFD1-214ENST00000554819 C12orf74Q32Q52 190 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 OR6V1Q8N148 313 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 CLDN22Q8N7P3 220 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 ST6GALNAC3Q8NDV1 305 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 C2orf50Q96LR7 162 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 PRRT1Q99946 306 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 CMSS1Q9BQ75 279 aaKnown RBP0.21□□□□□ -2.38
SCFD1-214ENST00000554819 PARD6GQ9BYG4 376 aaPredicted RBP0.21□□□□□ -2.38
SCFD1-214ENST00000554819 TLNRD1Q9H1K6 362 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 HEATR1Q9H583 2144 aaKnown RBP0.21□□□□□ -2.38
SCFD1-214ENST00000554819 UTP11Q9Y3A2 253 aaKnown RBP0.21□□□□□ -2.38
SCFD1-214ENST00000554819 ZDBF2Q9HCK1 2354 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 FLNBO75369 2602 aaKnown RBP0.21□□□□□ -2.38
SCFD1-214ENST00000554819 MEGF8Q7Z7M0 2845 aa0.21□□□□□ -2.38
SCFD1-214ENST00000554819 KDM6AO15550 1401 aaPredicted RBP0.21□□□□□ -2.38
SCFD1-214ENST00000554819 UNC13CQ8NB66 2214 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 IGHV1-58A0A0C4DH39 117 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 TLCD2A6NGC4 264 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 SMIM23A6NLE4 172 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 J3QRK9 145 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 NUPR1O60356 82 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 ZNF682O95780 498 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 DHFRP00374 187 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 IGLV3-1P01715 115 aa0.2□□□□□ -2.38
SCFD1-214ENST00000554819 AP3S2P59780 193 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms