RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 RRN3P1Q2M238 152 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 UNQ6190/PRO20217Q6UXQ8 127 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 PHF13Q86YI8 300 aaPredicted RBP1□□□□□ -2.25
SCFD1-213ENST00000554776 EXOC3-AS1Q8N2X6 119 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 SLC30A7Q8NEW0 376 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 PRADC1Q9BSG0 188 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 SOX21Q9Y651 276 aaPredicted RBP1□□□□□ -2.25
SCFD1-213ENST00000554776 RP1L1Q8IWN7 2480 aaPredicted RBP1□□□□□ -2.25
SCFD1-213ENST00000554776 FCGBPQ9Y6R7 5405 aaPredicted RBP1□□□□□ -2.25
SCFD1-213ENST00000554776 RIMBP3CA6NJZ7 1639 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 RIMBP3BA6NNM3 1639 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 RIMBP3Q9UFD9 1639 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 IGKV3-7A0A075B6H7 116 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 TAX1BP3O14907 124 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 LYZL6O75951 148 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 ATG12O94817 140 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 C1QBP02746 253 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 MIFP14174 115 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 G0S2P27469 103 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 ZNF93P35789 620 aaPredicted RBP0.99□□□□□ -2.25
SCFD1-213ENST00000554776 RAB4BP61018 213 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 GNG5P63218 68 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 PDE6HQ13956 83 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.99□□□□□ -2.25
SCFD1-213ENST00000554776 CLECL1Q8IZS7 167 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 LINC00301Q8NCQ3 95 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 OR2T10Q8NGZ9 312 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 AP3S1Q92572 193 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 MIXL1Q9H2W2 232 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 TRABDQ9H4I3 376 aa0.99□□□□□ -2.25
SCFD1-213ENST00000554776 FMN1Q68DA7 1419 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 ARHGEF28Q8N1W1 1705 aaKnown RBP0.98□□□□□ -2.25
SCFD1-213ENST00000554776 SCN8AQ9UQD0 1980 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 TRBV6-8A0A0A6YYG3 113 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 C7orf71A4D174 169 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 G3V2T6 193 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 TMEM256-PLSCR3K7ERE1 68 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 TIMM17BO60830 172 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 IFNA7P01567 189 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 BAALC-AS2P0C853 105 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 RHOGP84095 191 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 RPL19P84098 196 aaKnown RBP0.98□□□□□ -2.25
SCFD1-213ENST00000554776 SNCBQ16143 134 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 KRTAP21-3Q3LHN1 58 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 PDZD9Q8IXQ8 264 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 Q8IYB0 196 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 C3orf56Q8N813 242 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 C12orf29Q8N999 325 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 OR4C6Q8NH72 309 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 RETNLBQ9BQ08 111 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 C6orf62Q9GZU0 229 aaPredicted RBP0.98□□□□□ -2.25
SCFD1-213ENST00000554776 CYSTM1Q9H1C7 97 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 RNF122Q9H9V4 155 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 MED9Q9NWA0 146 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 STOML2Q9UJZ1 356 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 PCTPQ9UKL6 214 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 OBSL1O75147 1896 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 ALPK2Q86TB3 2170 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 TAF1LQ8IZX4 1826 aa0.98□□□□□ -2.25
SCFD1-213ENST00000554776 EML6Q6ZMW3 1958 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 CEP192Q8TEP8 1941 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 TRAV12-1A0A0B4J245 112 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 C19orf84I3L1E1 186 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 NDUFB3O43676 98 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 PROSCO94903 275 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 ANGP03950 147 aaKnown RBP0.97□□□□□ -2.25
SCFD1-213ENST00000554776 BCL2L15Q5TBC7 163 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 SMIM20Q8N5G0 67 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 ZNF418Q8TF45 676 aaPredicted RBP0.97□□□□□ -2.25
SCFD1-213ENST00000554776 SFT2D1Q8WV19 159 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 HOPXQ9BPY8 73 aaPredicted RBP0.97□□□□□ -2.25
SCFD1-213ENST00000554776 PAIP2Q9BPZ3 127 aaKnown RBP0.97□□□□□ -2.25
SCFD1-213ENST00000554776 IMUPQ9GZP8 106 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 GID8Q9NWU2 228 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 NHP2Q9NX24 153 aaKnown RBP0.97□□□□□ -2.25
SCFD1-213ENST00000554776 PRNDQ9UKY0 176 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 PYCARDQ9ULZ3 195 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 HS3ST2Q9Y278 367 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 DIDO1Q9BTC0 2240 aaKnown RBP0.97□□□□□ -2.25
SCFD1-213ENST00000554776 SBF1O95248 1867 aa0.97□□□□□ -2.25
SCFD1-213ENST00000554776 COL6A6A6NMZ7 2263 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 DENND4CQ5VZ89 1909 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 CCDC160A6NGH7 325 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 TMEM238C9JI98 176 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 M0R378 163 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 NDUFC2O95298 119 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 NFYBP25208 207 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 GNG10P50151 68 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 TAS2R41P59536 307 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 KRTAP10-4P60372 401 aaPredicted RBP0.96□□□□□ -2.26
SCFD1-213ENST00000554776 UBE2BP63146 152 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 GNG3P63215 75 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 SLC25A21Q9BQT8 299 aaPredicted RBP0.96□□□□□ -2.26
SCFD1-213ENST00000554776 GINS3Q9BRX5 216 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 TMEM126AQ9H061 195 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 ACER3Q9NUN7 267 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 KLK9Q9UKQ9 250 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 SNURFQ9Y675 71 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 POLEQ07864 2286 aa0.96□□□□□ -2.26
SCFD1-213ENST00000554776 DOCK4Q8N1I0 1966 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms