RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 NPIPB3Q92617 1050 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 RASL10AQ92737 203 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 ARPC1AQ92747 370 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 UBE2E3Q969T4 207 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 BORCS7Q96B45 105 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 PLEKHB2Q96CS7 222 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 AGMATQ9BSE5 352 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 TMEM70Q9BUB7 260 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 CST11Q9H112 138 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 C20orf141Q9NUB4 165 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 HRASLS2Q9NWW9 162 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 TRPM6Q9BX84 2022 aa3.56□□□□□ -1.84
ATXN3-227ENST00000554491 DSPPQ9NZW4 1301 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 COL6A5A8TX70 2615 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 ANKRD36A6QL64 1941 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 LOC107984640A0A0U1RRK4 108 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-227ENST00000554491 DAPL1A0PJW8 107 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 CEACAM18A8MTB9 384 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 IFNL4K9M1U5 179 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 PLPP1O14494 284 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 SOCS1O15524 211 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 CRXO43186 299 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-227ENST00000554491 NUPR1O60356 82 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 MPDU1O75352 247 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 ZNF737O75373 536 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 NDUFA7O95182 113 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 PPP1R3DO95685 299 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 VPREB1P12018 145 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 MYOD1P15172 320 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 VDAC1P21796 283 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 GPR183P32249 361 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 ASIPP42127 132 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 EFNB2P52799 333 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 MTCP1P56278 107 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 RBM11P57052 281 aaKnown RBP3.55□□□□□ -1.84
ATXN3-227ENST00000554491 RND3P61587 244 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 CD164Q04900 197 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 HSPB3Q12988 150 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 DIAPH2-AS1Q14236 149 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 GGTLC2Q14390 218 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 HES1Q14469 280 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 GUSBP1Q15486 140 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 CST6Q15828 149 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 IZUMO4Q1ZYL8 232 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 DEFB109BQ30KR1 87 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 LRRC37A5PQ49AS3 106 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 MORN3Q6PF18 240 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-227ENST00000554491 AMTNQ6UX39 209 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 PRSS45Q7RTY3 260 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 ZNF329Q86UD4 541 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 TBC1D26Q86UD7 250 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 SLC25A42Q86VD7 318 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 ATOH7Q8N100 152 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 OR5D14Q8NGL3 314 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 TMEM191AQ9H0A3 160 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 RNASE7Q9H1E1 156 aaKnown RBP3.55□□□□□ -1.84
ATXN3-227ENST00000554491 IKZF5Q9H5V7 419 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 PLEKHF2Q9H8W4 249 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 NRN1Q9NPD7 142 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 TAAR3PQ9P1P4 343 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 GNG12Q9UBI6 72 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 PEMTQ9UBM1 199 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 MPC1Q9Y5U8 109 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 TACC2O95359 2948 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 DCHS2Q6V1P9 2916 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 CACNA1CQ13936 2221 aa3.55□□□□□ -1.84
ATXN3-227ENST00000554491 PRRC2AP48634 2157 aaKnown RBP3.55□□□□□ -1.84
ATXN3-227ENST00000554491 FLNAP21333 2647 aaKnown RBP3.55□□□□□ -1.84
ATXN3-227ENST00000554491 DOCK4Q8N1I0 1966 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 PRRC2CQ9Y520 2896 aaKnown RBP3.54□□□□□ -1.84
ATXN3-227ENST00000554491 TRAV1-1A0A0B4J248 108 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 TSPAN11A1L157 253 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 C1orf226A1L170 272 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 A6NIN4 97 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 ZNF736B4DX44 427 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-227ENST00000554491 H3BMG7 143 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 K7N7A8 449 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 HSPB6O14558 160 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 PITX3O75364 302 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 ARL6IP5O75915 188 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 STK17BO94768 372 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 RENP00797 406 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 PRH1P02810 166 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 SLC25A5P05141 298 aaKnown RBP3.54□□□□□ -1.84
ATXN3-227ENST00000554491 MRPL3P09001 348 aaKnown RBP3.54□□□□□ -1.84
ATXN3-227ENST00000554491 IGLL1P15814 213 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 CRISP2P16562 243 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 BCL3P20749 454 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 LEPP41159 167 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 SPINT3P49223 89 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 DSCR9P59020 149 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 RPL36AP83881 106 aaKnown RBP3.54□□□□□ -1.84
ATXN3-227ENST00000554491 ZNF85Q03923 595 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 FUT5Q11128 374 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 C1orf61Q13536 156 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 DEFB133Q30KQ1 61 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 ATP1A1-AS1Q5TC04 95 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 PAQR6Q6TCH4 344 aa3.54□□□□□ -1.84
ATXN3-227ENST00000554491 FAM231DQ6ZW35 169 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms