RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 DLX1P56177 255 aa13.72□□□□□ -0.21
PPP4R3A-202ENST00000554390 OR1B1Q8NGR6 318 aa13.72□□□□□ -0.21
PPP4R3A-202ENST00000554390 FER1L6-AS2Q96M78 137 aa13.72□□□□□ -0.21
PPP4R3A-202ENST00000554390 CHRDL1Q9BU40 450 aa13.72□□□□□ -0.21
PPP4R3A-202ENST00000554390 FNDC4Q9H6D8 234 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3A-202ENST00000554390 ZGRF1Q86YA3 2104 aa13.72□□□□□ -0.21
PPP4R3A-202ENST00000554390 IGHV3-21A0A0B4J1V1 117 aa13.71□□□□□ -0.21
PPP4R3A-202ENST00000554390 PPIAL4DF5H284 164 aa13.71□□□□□ -0.21
PPP4R3A-202ENST00000554390 TCF24Q7RTU0 167 aa13.71□□□□□ -0.21
PPP4R3A-202ENST00000554390 CHCHD1Q96BP2 118 aaKnown RBP13.71□□□□□ -0.21
PPP4R3A-202ENST00000554390 TMEM265A0A087WTH1 108 aa13.71□□□□□ -0.21
PPP4R3A-202ENST00000554390 ATP5L2Q7Z4Y8 100 aa13.71□□□□□ -0.21
PPP4R3A-202ENST00000554390 TMEM14BQ9NUH8 114 aa13.71□□□□□ -0.21
PPP4R3A-202ENST00000554390 OR51B2Q9Y5P1 312 aa13.71□□□□□ -0.21
PPP4R3A-202ENST00000554390 J3QW42 95 aa13.71□□□□□ -0.22
PPP4R3A-202ENST00000554390 HIST1H1EP10412 219 aaKnown RBP13.71□□□□□ -0.22
PPP4R3A-202ENST00000554390 PRR7Q8TB68 274 aa13.71□□□□□ -0.22
PPP4R3A-202ENST00000554390 MAP1LC3CQ9BXW4 147 aa13.71□□□□□ -0.22
PPP4R3A-202ENST00000554390 FOXA2Q9Y261 457 aaPredicted RBP13.71□□□□□ -0.22
PPP4R3A-202ENST00000554390 FNDC10F2Z333 226 aa13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 HBBP68871 147 aa13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 PAX2Q02962 417 aa13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 C17orf58Q2M2W7 97 aa13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 FAM167A-AS1Q96KT0 104 aa13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 SLC25A2Q9BXI2 301 aa13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 BSNQ9UPA5 3926 aa13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 G3V4G9 280 aa13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 TMEM178AQ8NBL3 297 aa13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 OR4S2Q8NH73 311 aa13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 MS4A6AQ9H2W1 248 aa13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 TIMM8BQ9Y5J9 83 aaPredicted RBP13.7□□□□□ -0.22
PPP4R3A-202ENST00000554390 PEX7O00628 323 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 APOA2P02652 100 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 ZNF138P52744 262 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 DIAPH2-AS1Q14236 149 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 UFSP1Q6NVU6 142 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 C2orf91Q6ZV80 131 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 GUCD1Q96NT3 240 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 C19orf24Q9BVV8 132 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 SRRM5B3KS81 715 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 PET117Q6UWS5 81 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 DDB2Q92466 427 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 PRO3102Q9H379 93 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 OTOGLQ3ZCN5 2332 aa13.69□□□□□ -0.22
PPP4R3A-202ENST00000554390 MGST3O14880 152 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 UQCRFS1P47985 274 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 GNG5P63218 68 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 HTR1DP28221 377 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 C1orf185Q5T7R7 199 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 ZNF329Q86UD4 541 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 H1FXQ92522 213 aaKnown RBP13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 ASCL2Q99929 193 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 C7orf69Q9H7B7 122 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 JPT1Q9UK76 154 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 CEP295Q9C0D2 2601 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 LIPFP07098 398 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 SP9P0CG40 484 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 ARF6P62330 175 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 GTF2H5Q6ZYL4 71 aa13.68□□□□□ -0.22
PPP4R3A-202ENST00000554390 KIR2DS2P43631 304 aa13.67□□□□□ -0.22
PPP4R3A-202ENST00000554390 ZNF137PP52743 207 aa13.67□□□□□ -0.22
PPP4R3A-202ENST00000554390 CCL8P80075 99 aa13.67□□□□□ -0.22
PPP4R3A-202ENST00000554390 RUSC1-AS1Q66K80 236 aa13.67□□□□□ -0.22
PPP4R3A-202ENST00000554390 BPIFA4PQ86YQ2 179 aa13.67□□□□□ -0.22
PPP4R3A-202ENST00000554390 DSCAML1Q8TD84 2053 aa13.67□□□□□ -0.22
PPP4R3A-202ENST00000554390 COX8AP10176 69 aa13.67□□□□□ -0.22
PPP4R3A-202ENST00000554390 TMEM97Q5BJF2 176 aa13.67□□□□□ -0.22
PPP4R3A-202ENST00000554390 CCL3L1P16619 93 aa13.66□□□□□ -0.22
PPP4R3A-202ENST00000554390 SEC11AP67812 179 aa13.66□□□□□ -0.22
PPP4R3A-202ENST00000554390 AP1S3Q96PC3 154 aa13.66□□□□□ -0.22
PPP4R3A-202ENST00000554390 JMJD8Q96S16 334 aa13.66□□□□□ -0.22
PPP4R3A-202ENST00000554390 NAA38Q9BRA0 125 aaKnown RBP13.66□□□□□ -0.22
PPP4R3A-202ENST00000554390 MRPL32Q9BYC8 188 aaKnown RBP13.66□□□□□ -0.22
PPP4R3A-202ENST00000554390 WNK2Q9Y3S1 2297 aa13.66□□□□□ -0.22
PPP4R3A-202ENST00000554390 C5orf17Q8NAS9 161 aa13.66□□□□□ -0.22
PPP4R3A-202ENST00000554390 PGLYRP4Q96LB8 373 aa13.66□□□□□ -0.22
PPP4R3A-202ENST00000554390 OR5AL1P0C617 328 aa13.65□□□□□ -0.22
PPP4R3A-202ENST00000554390 Q71RC1 249 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3A-202ENST00000554390 BLNKQ8WV28 456 aa13.65□□□□□ -0.22
PPP4R3A-202ENST00000554390 IGHV3-72A0A0B4J1Y9 119 aa13.65□□□□□ -0.22
PPP4R3A-202ENST00000554390 PSMB11A5LHX3 300 aa13.65□□□□□ -0.22
PPP4R3A-202ENST00000554390 GTSF1Q8WW33 167 aa13.65□□□□□ -0.22
PPP4R3A-202ENST00000554390 PAXXQ9BUH6 204 aa13.65□□□□□ -0.22
PPP4R3A-202ENST00000554390 MRPL36Q9P0J6 103 aaKnown RBP13.65□□□□□ -0.22
PPP4R3A-202ENST00000554390 H3BUT2 72 aa13.65□□□□□ -0.22
PPP4R3A-202ENST00000554390 SAA1P0DJI8 122 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3A-202ENST00000554390 LINC00322Q6ZN03 302 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3A-202ENST00000554390 RAI1Q7Z5J4 1906 aaPredicted RBP13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 C9orf118A6NHY6 69 aa13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 LINC01545Q5VT33 79 aa13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 BHLHA15Q7RTS1 189 aaPredicted RBP13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 DKK4Q9UBT3 224 aa13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 HSPB8Q9UJY1 196 aa13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 COL12A1Q99715 3063 aa13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 TEX50A0A1B0GTY4 177 aa13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 CT45A6P0DMU7 189 aa13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 CT45A5P0DMU8 189 aa13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 CT45A7P0DMV0 189 aa13.64□□□□□ -0.23
PPP4R3A-202ENST00000554390 SEM1Q6ZVN7 128 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms