RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 IGLV1-44P01699 117 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 CX3CL1P78423 397 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 TBR1Q16650 682 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 FOXA2Q9Y261 457 aaPredicted RBP9.29□□□□□ -0.92
PTPN21-205ENST00000554270 INSIG2Q9Y5U4 225 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 DLEU1O43261 78 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 YPEL3P61236 119 aaPredicted RBP9.29□□□□□ -0.92
PTPN21-205ENST00000554270 FOXC1Q12948 553 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 AARDQ4LEZ3 155 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 MUC15Q8N387 334 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 ABHD17AQ96GS6 310 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 CLEC7AQ9BXN2 247 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 TMEM14BQ9NUH8 114 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 TET2Q6N021 2002 aaPredicted RBP9.29□□□□□ -0.92
PTPN21-205ENST00000554270 NBEAP1P0C6P0 100 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 RNASE2P10153 161 aaKnown RBP9.29□□□□□ -0.92
PTPN21-205ENST00000554270 HIST1H1EP10412 219 aaKnown RBP9.29□□□□□ -0.92
PTPN21-205ENST00000554270 PDLIM4P50479 330 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 FXYD7P58549 80 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 ONECUT1Q9UBC0 465 aa9.29□□□□□ -0.92
PTPN21-205ENST00000554270 RPUSD1Q9UJJ7 312 aaKnown RBP9.29□□□□□ -0.92
PTPN21-205ENST00000554270 PRR30Q53SZ7 412 aaPredicted RBP9.28□□□□□ -0.92
PTPN21-205ENST00000554270 NUP35Q8NFH5 326 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 GNB1LQ9BYB4 327 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 FBXL15Q9H469 300 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 BET1LQ9NYM9 111 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 LAMTOR2Q9Y2Q5 125 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 LSM4Q9Y4Z0 139 aaKnown RBP9.28□□□□□ -0.92
PTPN21-205ENST00000554270 RELNP78509 3460 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 EIF4EBP1Q13541 118 aaPredicted RBP9.28□□□□□ -0.92
PTPN21-205ENST00000554270 TMEM136Q6ZRR5 245 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 OR4C13Q8NGP0 309 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 TSKUQ8WUA8 353 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 F2RL2O00254 374 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 CRYABP02511 175 aaKnown RBP9.28□□□□□ -0.92
PTPN21-205ENST00000554270 EXOC3-AS1Q8N2X6 119 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 RPEQ96AT9 228 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 HYPMO75409 117 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 IGHV3-23P01764 117 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 CNTFRP26992 372 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 RPL27AP46776 148 aaKnown RBP9.28□□□□□ -0.92
PTPN21-205ENST00000554270 WFDC3Q8IUB2 231 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 LINC01560Q8TB33 94 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 OSTCQ9NRP0 149 aa9.28□□□□□ -0.92
PTPN21-205ENST00000554270 ZNF292O60281 2723 aa9.27□□□□□ -0.92
PTPN21-205ENST00000554270 PRR20EP86478 221 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 PRR20CP86479 221 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 PRR20DP86480 221 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 PRR20BP86481 221 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 PRR20AP86496 221 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 TMEM200BQ69YZ2 307 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 OR8A1Q8NGG7 326 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 PRSS3P2Q8NHM4 247 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 PERPQ96FX8 193 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 FNDC4Q9H6D8 234 aaPredicted RBP9.27□□□□□ -0.93
PTPN21-205ENST00000554270 CACNA1AO00555 2505 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 hDV102S1A0JD36 115 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 IZUMO1RA6ND01 250 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 C9JCJ5 164 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 WT1-ASQ06250 92 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 ZNF841Q6ZN19 808 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 C1orf174Q8IYL3 243 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 CIARTQ8N365 385 aaPredicted RBP9.27□□□□□ -0.93
PTPN21-205ENST00000554270 STPG4Q8N801 248 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 OR8B3Q8NGG8 313 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 SRSF12Q8WXF0 261 aaKnown RBP9.27□□□□□ -0.93
PTPN21-205ENST00000554270 ZZEF1O43149 2961 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 UQCRFS1P47985 274 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 PPOXP50336 477 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 KLF17Q5JT82 389 aaPredicted RBP9.27□□□□□ -0.93
PTPN21-205ENST00000554270 VSTM2AQ8TAG5 236 aa9.27□□□□□ -0.93
PTPN21-205ENST00000554270 MRPL36Q9P0J6 103 aaKnown RBP9.27□□□□□ -0.93
PTPN21-205ENST00000554270 NCBP2LA6PVI3 153 aaKnown RBP9.26□□□□□ -0.93
PTPN21-205ENST00000554270 C17orf100A8MU93 164 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 ZNF596Q8TC21 504 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 AP1S3Q96PC3 154 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 MBD3L4A6NDZ8 208 aaPredicted RBP9.26□□□□□ -0.93
PTPN21-205ENST00000554270 MBD3L3A6NE82 208 aaPredicted RBP9.26□□□□□ -0.93
PTPN21-205ENST00000554270 MBD3L5A6NJ08 208 aaPredicted RBP9.26□□□□□ -0.93
PTPN21-205ENST00000554270 ZNF788Q6ZQV5 615 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 MBD3L2Q8NHZ7 208 aaPredicted RBP9.26□□□□□ -0.93
PTPN21-205ENST00000554270 C1orf159Q96HA4 380 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 RITA1Q96K30 269 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 IGHV3OR16-13A0A075B7E8 117 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 IGHV3-74A0A0B4J1X5 117 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 DNLZQ5SXM8 178 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 C18orf32Q8TCD1 76 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 ZNF503Q96F45 646 aa9.26□□□□□ -0.93
PTPN21-205ENST00000554270 A0A1W2PRE2 83 aa9.25□□□□□ -0.93
PTPN21-205ENST00000554270 OR4C46A6NHA9 309 aa9.25□□□□□ -0.93
PTPN21-205ENST00000554270 NIT1Q86X76 327 aa9.25□□□□□ -0.93
PTPN21-205ENST00000554270 A0A0G2JNJ9 132 aa9.25□□□□□ -0.93
PTPN21-205ENST00000554270 CA7P43166 264 aa9.25□□□□□ -0.93
PTPN21-205ENST00000554270 LINC00310P59036 64 aa9.25□□□□□ -0.93
PTPN21-205ENST00000554270 ADIPOQQ15848 244 aa9.25□□□□□ -0.93
PTPN21-205ENST00000554270 RASL11BQ9BPW5 248 aa9.25□□□□□ -0.93
PTPN21-205ENST00000554270 SFXN3Q9BWM7 321 aa9.25□□□□□ -0.93
PTPN21-205ENST00000554270 Q9UFV3 132 aa9.25□□□□□ -0.93
PTPN21-205ENST00000554270 KIR2DL5BA0A0G2JN68 375 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms