RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 AKAP9Q99996 3911 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 C9orf170A2RU37 121 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 F6UB75 175 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 J3QRE1 110 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 MFNGO00587 321 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 ATG12O94817 140 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 PRM2P04554 102 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 CTSDP07339 412 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 RD3LP0DJH9 198 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SCGB1A1P11684 91 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 CBLN1P23435 193 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 TNFSF8P32971 234 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 RPL5P46777 297 aaKnown RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 EIF2B2P49770 351 aaKnown RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 TAS2R19P59542 299 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SEC61GP60059 68 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 HIST1H1AQ02539 215 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 PAX5Q02548 391 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 BAXQ07812 192 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 IAH1Q2TAA2 248 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 VWC2Q2TAL6 325 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 PXDC1Q5TGL8 231 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 LPCAT3Q6P1A2 487 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 LYG2Q86SG7 212 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF709Q8N972 641 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF439Q8NDP4 499 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 OR4C16Q8NGL9 310 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 OR11H2Q8NH07 326 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 TERB2Q8NHR7 220 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 OSR1Q8TAX0 266 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 THAP6Q8TBB0 222 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 DPH3Q96FX2 82 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 GRAMD2BQ96HH9 432 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 RSG1Q9BU20 258 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SRRQ9GZT4 340 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 ARL6Q9H0F7 186 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF696Q9H7X3 374 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 TRAV12-2A0A075B6T6 113 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 TRBV6-7A0A0A0MS04 114 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 A0A0J9YWU9 116 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 A0A0J9YY99 117 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 A0A1B0GV90 55 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 OR4C46A6NHA9 309 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 E5RGE8 158 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 F5H768 121 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 RS1O15537 224 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 JTBO76095 146 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 DUS4LO95620 317 aaKnown RBP1.92□□□□□ -2.1
PRPF39-205ENST00000554081 NAPSAO96009 420 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 FSHBP01225 129 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 IGLV3-1P01715 115 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 HLA-DRB1P01911 266 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 FGF2P09038 288 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 NPY1RP25929 384 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 ID1P41134 155 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 NANOS2P60321 138 aaKnown RBP1.92□□□□□ -2.1
PRPF39-205ENST00000554081 HMGN3Q15651 99 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 RRN3P1Q2M238 152 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 COX19Q49B96 90 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 EBLN2Q6P2I7 272 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 LGI3Q8N145 548 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF738Q8NE65 137 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 OR51G1Q8NGK1 321 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 DEFB104AQ8WTQ1 72 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 FBLIM1Q8WUP2 373 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 LSM10Q969L4 123 aaKnown RBP1.92□□□□□ -2.1
PRPF39-205ENST00000554081 SLC25A38Q96DW6 304 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 CXorf58Q96LI9 332 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 WWC2-AS2Q96NR7 200 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 TP53RKQ96S44 253 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-205ENST00000554081 PRNDQ9UKY0 176 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 GPR132Q9UNW8 380 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 TRAV1-2A0A0B4J238 106 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 A0A0U1RRA0 63 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 TEX50A0A1B0GTY4 177 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 MPTX1A8MV57 137 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 SMLR1H3BR10 107 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 SNAI2O43623 268 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 OR7C2O60412 319 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 MRPS14O60783 128 aaKnown RBP1.92□□□□□ -2.1
PRPF39-205ENST00000554081 SLC22A5O76082 557 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 IGHG4P01861 327 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 UBE2KP61086 200 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 HSPE1P61604 102 aaKnown RBP1.92□□□□□ -2.1
PRPF39-205ENST00000554081 BLOC1S1P78537 153 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 TMEM187Q14656 261 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 FCN2Q15485 313 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 LCE4AQ5TA78 99 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 IL34Q6ZMJ4 242 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 C9orf139Q6ZV77 190 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 SSX7Q7RTT5 188 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 H1FOOQ8IZA3 346 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-205ENST00000554081 FAM71E2Q8N5Q1 922 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 GDPD1Q8N9F7 314 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 OR5AN1Q8NGI8 311 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 MUC7Q8TAX7 377 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 DDB2Q92466 427 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 LINC00477Q96M19 166 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 SCGB3A2Q96PL1 93 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms