RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 PSG5Q15238 335 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 ZCCHC24Q8N2G6 241 aaKnown RBP9.94□□□□□ -0.82
SHMT2-207ENST00000553837 ABHD12Q8N2K0 398 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 TMEM140Q9NV12 185 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 MAP1BP46821 2468 aaKnown RBP9.94□□□□□ -0.82
SHMT2-207ENST00000553837 ADGRG4Q8IZF6 3080 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 TANC2Q9HCD6 1990 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 MUC21A0A0G2JKD1 596 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 A0A0G2JNJ9 132 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 MUC21A0A140T8X8 626 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 KBTBD11-OT1A0A1B0GTJ5 212 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 GAGE10A6NGK3 116 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 MYOD1P15172 320 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 CRYBA4P53673 196 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 MUC21Q5SSG8 566 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 C1orf159Q96HA4 380 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 Q9UFV3 132 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 DYSFO75923 2080 aa9.93□□□□□ -0.82
SHMT2-207ENST00000553837 PIEZO2Q9H5I5 2752 aa9.93□□□□□ -0.82
SHMT2-207ENST00000553837 IGLV2-8P01709 118 aa9.93□□□□□ -0.82
SHMT2-207ENST00000553837 CA7P43166 264 aa9.93□□□□□ -0.82
SHMT2-207ENST00000553837 RAB9AP51151 201 aa9.93□□□□□ -0.82
SHMT2-207ENST00000553837 TCTEX1D4Q5JR98 221 aa9.93□□□□□ -0.82
SHMT2-207ENST00000553837 UFSP1Q6NVU6 142 aa9.93□□□□□ -0.82
SHMT2-207ENST00000553837 ST6GALNAC6Q969X2 333 aa9.93□□□□□ -0.82
SHMT2-207ENST00000553837 S1PR3Q99500 378 aa9.93□□□□□ -0.82
SHMT2-207ENST00000553837 SPTBN2O15020 2390 aa9.93□□□□□ -0.82
SHMT2-207ENST00000553837 FCN3O75636 299 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 AZU1P20160 251 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 MFAP2P55001 183 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 RTL8BQ17RB0 113 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 MIR17HGQ75NE6 70 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 ABHD17AQ96GS6 310 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 OR2J3O76001 311 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 CCL8P80075 99 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 ZNF788Q6ZQV5 615 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 SPATA12Q7Z6I5 190 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 OR2T6Q8NHC8 308 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 IGF2BP2-AS1Q96M15 143 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 PLEKHA3Q9HB20 300 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 TCF19Q9Y242 345 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 ZGRF1Q86YA3 2104 aa9.92□□□□□ -0.82
SHMT2-207ENST00000553837 ROS1P08922 2347 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 HLA-DRB1P01911 266 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 THBDP07204 575 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 CKS1BP61024 79 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 RPL8P62917 257 aaKnown RBP9.91□□□□□ -0.82
SHMT2-207ENST00000553837 PRR20EP86478 221 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 PRR20CP86479 221 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 PRR20DP86480 221 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 PRR20BP86481 221 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 PRR20AP86496 221 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 KIR3DL3Q8N743 410 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 Q8NA96 180 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 GRAMD2BQ96HH9 432 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 TMEM191AQ9H0A3 160 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 TRAV26-1A0A087WT03 109 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 SYS1-DBNDD2H3BUS1 97 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 ACTL6BO94805 426 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 ERVK-16P61578 105 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 ZNF479Q96JC4 524 aa9.91□□□□□ -0.82
SHMT2-207ENST00000553837 ACACAQ13085 2346 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 TRAV8-6A0A0B4J262 113 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 A0A1W2PRE2 83 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 hDV102S1A0JD36 115 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 CA1P00915 261 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-207ENST00000553837 HIST1H1AQ02539 215 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-207ENST00000553837 GDF5OSQ5U4N7 250 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 FAM231DQ6ZW35 169 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 NUP37Q8NFH4 326 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 FAM168AQ92567 244 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 CHRDL1Q9BU40 450 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 MS4A6AQ9H2W1 248 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 IDI2-AS1Q9NZ38 188 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 APC2O95996 2303 aa9.9□□□□□ -0.82
SHMT2-207ENST00000553837 TRGV8A0A0C4DH27 118 aa9.9□□□□□ -0.83
SHMT2-207ENST00000553837 C15orf61A6NNL5 157 aa9.9□□□□□ -0.83
SHMT2-207ENST00000553837 GATA2P23769 480 aaPredicted RBP9.9□□□□□ -0.83
SHMT2-207ENST00000553837 TAS2R45P59539 299 aa9.9□□□□□ -0.83
SHMT2-207ENST00000553837 ADIPOQQ15848 244 aa9.9□□□□□ -0.83
SHMT2-207ENST00000553837 PRR30Q53SZ7 412 aaPredicted RBP9.9□□□□□ -0.83
SHMT2-207ENST00000553837 TEX36Q5VZQ5 186 aa9.9□□□□□ -0.83
SHMT2-207ENST00000553837 NUP35Q8NFH5 326 aa9.9□□□□□ -0.83
SHMT2-207ENST00000553837 MBD6Q96DN6 1003 aa9.9□□□□□ -0.83
SHMT2-207ENST00000553837 SSBP3Q9BWW4 388 aaPredicted RBP9.9□□□□□ -0.83
SHMT2-207ENST00000553837 LINC00574Q9H8X3 128 aa9.9□□□□□ -0.83
SHMT2-207ENST00000553837 SCRT2Q9NQ03 307 aa9.9□□□□□ -0.83
SHMT2-207ENST00000553837 PCNX1Q96RV3 2341 aa9.89□□□□□ -0.83
SHMT2-207ENST00000553837 SRRM4A7MD48 611 aaKnown RBP9.89□□□□□ -0.83
SHMT2-207ENST00000553837 GGTLC3B5MD39 225 aa9.89□□□□□ -0.83
SHMT2-207ENST00000553837 SLC25A17O43808 307 aa9.89□□□□□ -0.83
SHMT2-207ENST00000553837 IGKV1-16P04430 117 aa9.89□□□□□ -0.83
SHMT2-207ENST00000553837 CT45A6P0DMU7 189 aa9.89□□□□□ -0.83
SHMT2-207ENST00000553837 CT45A5P0DMU8 189 aa9.89□□□□□ -0.83
SHMT2-207ENST00000553837 CT45A7P0DMV0 189 aa9.89□□□□□ -0.83
SHMT2-207ENST00000553837 KIR2DS2P43631 304 aa9.89□□□□□ -0.83
SHMT2-207ENST00000553837 BSPH1Q075Z2 132 aa9.89□□□□□ -0.83
SHMT2-207ENST00000553837 CHCHD1Q96BP2 118 aaKnown RBP9.89□□□□□ -0.83
SHMT2-207ENST00000553837 NABP2Q9BQ15 211 aa9.89□□□□□ -0.83
SHMT2-207ENST00000553837 C19orf24Q9BVV8 132 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms