RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 RD3LP0DJH9 198 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 PSG1P11464 419 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 UCP1P25874 307 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 PSMB3P49720 205 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 PSG9Q00887 426 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 AARDQ4LEZ3 155 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 SPATA12Q7Z6I5 190 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 COQ8AQ8NI60 647 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 RNASEH2CQ8TDP1 164 aaKnown RBP6.38□□□□□ -1.39
SYNE2-209ENST00000553308 GPR146Q96CH1 333 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 CLUHP3Q96NS8 147 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 PBDC1Q9BVG4 233 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 HEYLQ9NQ87 328 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-209ENST00000553308 KLK11Q9UBX7 282 aa6.38□□□□□ -1.39
SYNE2-209ENST00000553308 NUDT3O95989 172 aa6.37□□□□□ -1.39
SYNE2-209ENST00000553308 ID1P41134 155 aa6.37□□□□□ -1.39
SYNE2-209ENST00000553308 LSM3P62310 102 aaKnown RBP6.37□□□□□ -1.39
SYNE2-209ENST00000553308 RNASE10Q5GAN6 216 aaKnown RBP6.37□□□□□ -1.39
SYNE2-209ENST00000553308 FAM78BQ5VT40 261 aa6.37□□□□□ -1.39
SYNE2-209ENST00000553308 OR13C8Q8NGS7 320 aa6.37□□□□□ -1.39
SYNE2-209ENST00000553308 OR52E5Q8NH55 327 aa6.37□□□□□ -1.39
SYNE2-209ENST00000553308 LHFPL5Q8TAF8 219 aa6.37□□□□□ -1.39
SYNE2-209ENST00000553308 RNF125Q96EQ8 232 aa6.37□□□□□ -1.39
SYNE2-209ENST00000553308 MAGT1Q9H0U3 335 aa6.37□□□□□ -1.39
SYNE2-209ENST00000553308 COPZ2Q9P299 210 aa6.37□□□□□ -1.39
SYNE2-209ENST00000553308 COMMD3Q9UBI1 195 aa6.37□□□□□ -1.39
SYNE2-209ENST00000553308 CACNG5Q9UF02 275 aa6.37□□□□□ -1.39
SYNE2-209ENST00000553308 A0A0J9YX75 114 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 CEBPZOSA8MTT3 80 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 ZNF705GA8MUZ8 300 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-209ENST00000553308 CD3DP04234 171 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 OR5AC1P0C628 307 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 DEFB130BP0DP73 79 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 DEFB130AP0DP74 79 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 ELK1P19419 428 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 ALDH3B2P48448 385 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 PAX9P55771 341 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 ETFRF1Q6IPR1 90 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 ARRDC1Q8N5I2 433 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 CCDC71LQ8N9Z2 235 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 OR4D10Q8NGI6 311 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 C20orf173Q96LM9 149 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 TMEM208Q9BTX3 173 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-209ENST00000553308 LINC00588Q9Y4M8 146 aa6.36□□□□□ -1.39
SYNE2-209ENST00000553308 SMIM31A0A1B0GVY4 71 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 F5H768 121 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 ISLRO14498 428 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 HPGDSO60760 199 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 CDS2O95674 445 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 APOA1P02647 267 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 NUP62P37198 522 aaPredicted RBP6.35□□□□□ -1.39
SYNE2-209ENST00000553308 LYZP61626 148 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 SUPT4H1P63272 117 aaKnown RBP6.35□□□□□ -1.39
SYNE2-209ENST00000553308 ZNF90Q03938 601 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 MEF2DQ14814 521 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 NMSQ5H8A3 153 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 SPATA31B1PQ5VZV4 182 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 OR8G2PQ6IF36 304 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 EBLN2Q6P2I7 272 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 AMTNQ6UX39 209 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 FAM219AQ8IW50 185 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 ZFAND1Q8TCF1 268 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 MARCH1Q8TCQ1 289 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 IGF2BP2-AS1Q96M15 143 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 KRTAP1-5Q9BYS1 174 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 TMEM222Q9H0R3 208 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 DOK5Q9P104 306 aa6.35□□□□□ -1.39
SYNE2-209ENST00000553308 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 IGKV1D-37A0A075B6S9 117 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 PLAC8L1A1L4L8 177 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 LYRM9A8MSI8 78 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 A8MTW9 85 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 M0R2Z0 102 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 CCL18P55774 89 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 FCN2Q15485 313 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 SPINK13Q1W4C9 94 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 SCGB2B2Q4G0G5 96 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 C1orf194Q5T5A4 169 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 SELENOHQ8IZQ5 122 aaKnown RBP6.34□□□□□ -1.39
SYNE2-209ENST00000553308 OR52I2Q8NH67 350 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 GLYATL2Q8WU03 294 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 RNF141Q8WVD5 230 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 RBPMSQ93062 196 aaKnown RBP6.34□□□□□ -1.39
SYNE2-209ENST00000553308 YIPF6Q96EC8 236 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 Q9H521 79 aa6.34□□□□□ -1.39
SYNE2-209ENST00000553308 TEX13DA0A0J9YY54 714 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-209ENST00000553308 ZFP92A6NM28 416 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 CRXO43186 299 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-209ENST00000553308 B3GALNT1O75752 331 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 AZU1P20160 251 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 OR2F1Q13607 317 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 KLF9Q13886 244 aaPredicted RBP6.33□□□□□ -1.4
SYNE2-209ENST00000553308 TMEM268Q5VZI3 342 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 FAAP20Q6NZ36 180 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 SSX7Q7RTT5 188 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 BAP18Q8IXM2 172 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 OR8I2Q8N0Y5 310 aa6.33□□□□□ -1.4
SYNE2-209ENST00000553308 OR11H7Q8NGC8 314 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms