RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TRBV6-5A0A0K0K1A5 114 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 DUXBA0A1W2PPF3 345 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 RIIAD1A6NNX1 92 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 PPP5D1E7EU14 171 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 M0R378 163 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 CST8O60676 142 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 BAALC-AS2P0C853 105 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 B2MP61769 119 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 UBE2BP63146 152 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 BRMS1LQ5PSV4 323 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 RPS19BP1Q86WX3 136 aaKnown RBP1.99□□□□□ -2.09
SCFD1-209ENST00000553280 PHF13Q86YI8 300 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-209ENST00000553280 STX19Q8N4C7 294 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 CANT1Q8WVQ1 401 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 MALSU1Q96EH3 234 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 PRADC1Q9BSG0 188 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 TMEM126AQ9H061 195 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 PCBD2Q9H0N5 130 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 YTHDC2Q9H6S0 1430 aaKnown RBP1.99□□□□□ -2.09
SCFD1-209ENST00000553280 GBF1Q92538 1859 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 RIMBP3CA6NJZ7 1639 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 RIMBP3BA6NNM3 1639 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 RIMBP3Q9UFD9 1639 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 HEATR5AQ86XA9 2040 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 TMEM256-PLSCR3K7ERE1 68 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 PGRMC1O00264 195 aaKnown RBP1.98□□□□□ -2.09
SCFD1-209ENST00000553280 APOA2P02652 100 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 ASAH2BP0C7U1 165 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 IDO1P14902 403 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 DYNLT1P63172 113 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 ZNF563Q8TA94 476 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 GPER1Q99527 375 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 OR2J1Q9GZK6 312 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 CENPHQ9H3R5 247 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 PCTPQ9UKL6 214 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 HS3ST2Q9Y278 367 aa1.98□□□□□ -2.09
SCFD1-209ENST00000553280 CCDC88AQ3V6T2 1871 aa1.97□□□□□ -2.09
SCFD1-209ENST00000553280 FN1P02751 2386 aaKnown RBP1.97□□□□□ -2.09
SCFD1-209ENST00000553280 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
SCFD1-209ENST00000553280 SNCBQ16143 134 aa1.97□□□□□ -2.09
SCFD1-209ENST00000553280 ESRGQ1W209 222 aa1.97□□□□□ -2.09
SCFD1-209ENST00000553280 SLC30A7Q8NEW0 376 aa1.97□□□□□ -2.09
SCFD1-209ENST00000553280 OR10J5Q8NHC4 309 aa1.97□□□□□ -2.09
SCFD1-209ENST00000553280 BCL2L10Q9HD36 194 aa1.97□□□□□ -2.09
SCFD1-209ENST00000553280 SMPXQ9UHP9 88 aa1.97□□□□□ -2.09
SCFD1-209ENST00000553280 MYH11P35749 1972 aa1.97□□□□□ -2.09
SCFD1-209ENST00000553280 NDUFB3O43676 98 aa1.96□□□□□ -2.1
SCFD1-209ENST00000553280 CSN2P05814 226 aa1.96□□□□□ -2.1
SCFD1-209ENST00000553280 MGST1P10620 155 aaKnown RBP1.96□□□□□ -2.1
SCFD1-209ENST00000553280 SSR2P43308 183 aa1.96□□□□□ -2.1
SCFD1-209ENST00000553280 SOSTDC1Q6X4U4 206 aa1.96□□□□□ -2.1
SCFD1-209ENST00000553280 PDZD9Q8IXQ8 264 aa1.96□□□□□ -2.1
SCFD1-209ENST00000553280 LINC00311Q8N616 119 aa1.96□□□□□ -2.1
SCFD1-209ENST00000553280 C3orf56Q8N813 242 aa1.96□□□□□ -2.1
SCFD1-209ENST00000553280 PLEKHB2Q96CS7 222 aa1.96□□□□□ -2.1
SCFD1-209ENST00000553280 TEX37Q96LM6 180 aa1.96□□□□□ -2.1
SCFD1-209ENST00000553280 MRPL32Q9BYC8 188 aaKnown RBP1.96□□□□□ -2.1
SCFD1-209ENST00000553280 CCDC88CQ9P219 2028 aa1.96□□□□□ -2.1
SCFD1-209ENST00000553280 DOCK10Q96BY6 2186 aa1.96□□□□□ -2.1
SCFD1-209ENST00000553280 ARHGEF28Q8N1W1 1705 aaKnown RBP1.95□□□□□ -2.1
SCFD1-209ENST00000553280 TRAV3A0A0B4J244 114 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 C2orf70A6NJV1 201 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 GPR31O00270 319 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 PROSCO94903 275 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 UBL3O95164 117 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 NFYBP25208 207 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 GLRXP35754 106 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 RNASE10Q5GAN6 216 aaKnown RBP1.95□□□□□ -2.1
SCFD1-209ENST00000553280 C10orf55Q5SWW7 151 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 NUP35Q8NFH5 326 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 NAA38Q9BRA0 125 aaKnown RBP1.95□□□□□ -2.1
SCFD1-209ENST00000553280 LINC00467Q9BRT7 94 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 OR5AC2Q9NZP5 309 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 BRWD1Q9NSI6 2320 aa1.95□□□□□ -2.1
SCFD1-209ENST00000553280 PBRM1Q86U86 1689 aa1.94□□□□□ -2.1
SCFD1-209ENST00000553280 A0A1B0GV72 72 aa1.94□□□□□ -2.1
SCFD1-209ENST00000553280 TIMM17BO60830 172 aa1.94□□□□□ -2.1
SCFD1-209ENST00000553280 TRGC2P03986 189 aa1.94□□□□□ -2.1
SCFD1-209ENST00000553280 OGNP20774 298 aaKnown RBP1.94□□□□□ -2.1
SCFD1-209ENST00000553280 INSL3P51460 131 aa1.94□□□□□ -2.1
SCFD1-209ENST00000553280 DYNLT3P51808 116 aa1.94□□□□□ -2.1
SCFD1-209ENST00000553280 RHOGP84095 191 aa1.94□□□□□ -2.1
SCFD1-209ENST00000553280 PDE6HQ13956 83 aa1.94□□□□□ -2.1
SCFD1-209ENST00000553280 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-209ENST00000553280 GPX7Q96SL4 187 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-209ENST00000553280 ADAT1Q9BUB4 502 aaKnown RBP1.94□□□□□ -2.1
SCFD1-209ENST00000553280 C14orf132Q9NPU4 83 aa1.94□□□□□ -2.1
SCFD1-209ENST00000553280 NCAPD3P42695 1498 aa1.94□□□□□ -2.1
SCFD1-209ENST00000553280 SBF1O95248 1867 aa1.93□□□□□ -2.1
SCFD1-209ENST00000553280 TRAV14DV4A0A0A6YYC5 116 aa1.93□□□□□ -2.1
SCFD1-209ENST00000553280 OR1I1O60431 355 aa1.93□□□□□ -2.1
SCFD1-209ENST00000553280 MRPS14O60783 128 aaKnown RBP1.93□□□□□ -2.1
SCFD1-209ENST00000553280 GADD45GO95257 159 aa1.93□□□□□ -2.1
SCFD1-209ENST00000553280 IFNA14P01570 189 aa1.93□□□□□ -2.1
SCFD1-209ENST00000553280 RNASE3P12724 160 aaKnown RBP1.93□□□□□ -2.1
SCFD1-209ENST00000553280 MYL5Q02045 173 aa1.93□□□□□ -2.1
SCFD1-209ENST00000553280 TMEM78Q5T7P6 136 aa1.93□□□□□ -2.1
SCFD1-209ENST00000553280 Q8N2B8 174 aa1.93□□□□□ -2.1
SCFD1-209ENST00000553280 LINC00301Q8NCQ3 95 aa1.93□□□□□ -2.1
SCFD1-209ENST00000553280 TEX47Q8TBZ9 253 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms