RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 GDF5OSQ5U4N7 250 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 HACD4Q5VWC8 232 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 LAIR2Q6ISS4 152 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 ZFP1Q6P2D0 407 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 ZNF818PQ6ZRF7 136 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 TMEM17Q86X19 198 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 BPIFB6Q8NFQ5 453 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 UFD1Q92890 307 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 C7orf50Q9BRJ6 194 aaKnown RBP3.72□□□□□ -1.81
HOXB3-213ENST00000552000 MND1Q9BWT6 205 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 SLC35B3Q9H1N7 401 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 ATG5Q9H1Y0 275 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 Q9H3A6 140 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 ZNF586Q9NXT0 402 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 ANXA10Q9UJ72 324 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 PRNDQ9UKY0 176 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 LSM2Q9Y333 95 aaKnown RBP3.72□□□□□ -1.81
HOXB3-213ENST00000552000 GOLT1BQ9Y3E0 138 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 HLA-DRB4X5D2U9 266 aa3.72□□□□□ -1.81
HOXB3-213ENST00000552000 F5H697 171 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 ATP8B1O43520 1251 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 IFNA5P01569 189 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 PRM2P04554 102 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 F2RP25116 425 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 RASSF2P50749 326 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 LINC00315P59091 139 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 GNG2P59768 71 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 ARL6IP1Q15041 203 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 SPHARQ15513 63 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 SPINK9Q5DT21 86 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 SERTAD4-AS1Q5TG53 156 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 C1orf158Q8N1D5 194 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 ZNF114Q8NC26 417 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 FCAMRQ8WWV6 532 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 TMEM230Q96A57 120 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 UHRF2Q96PU4 802 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 MAGT1Q9H0U3 335 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 FKBP11Q9NYL4 201 aa3.71□□□□□ -1.82
HOXB3-213ENST00000552000 MRPL36Q9P0J6 103 aaKnown RBP3.71□□□□□ -1.82
HOXB3-213ENST00000552000 A0A1W2PPQ1 181 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 IFITM5A6NNB3 132 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 LYRM9A8MSI8 78 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 ZNF705GA8MUZ8 300 aaPredicted RBP3.7□□□□□ -1.82
HOXB3-213ENST00000552000 TSC22D2O75157 780 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 IGKV1-17P01599 117 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 RLN1P04808 185 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 ATP5G1P05496 136 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 FCER2P06734 321 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 GNAO1P09471 354 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 HSMCR30P0CW71 290 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 NKX2-1P43699 371 aaPredicted RBP3.7□□□□□ -1.82
HOXB3-213ENST00000552000 ATP5G3P48201 142 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 ALDH3B2P48448 385 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 AP2S1P53680 142 aaPredicted RBP3.7□□□□□ -1.82
HOXB3-213ENST00000552000 ERVFC1-1P60608 527 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 ERHP84090 104 aaKnown RBP3.7□□□□□ -1.82
HOXB3-213ENST00000552000 PRCDQ00LT1 54 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 FABP5Q01469 135 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 FCN2Q15485 313 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 TIGITQ495A1 244 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 TMEM69Q5SWH9 247 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 Q6ZRN7 208 aaPredicted RBP3.7□□□□□ -1.82
HOXB3-213ENST00000552000 DHRSXQ8N5I4 330 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 ZNF709Q8N972 641 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 BEST4Q8NFU0 473 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 OR4B1Q8NGF8 309 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 OCC1Q8TAD7 63 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 LGALS14Q8TCE9 139 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 LINC00052Q96N35 136 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 TSC22D3Q99576 134 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 TMEM208Q9BTX3 173 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 CCDC90BQ9GZT6 254 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 NRN1Q9NPD7 142 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 PLCXD1Q9NUJ7 323 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 FKBP14Q9NWM8 211 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 TNXBP22105 4242 aa3.7□□□□□ -1.82
HOXB3-213ENST00000552000 PDCD5O14737 125 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 CASQ2O14958 399 aaPredicted RBP3.69□□□□□ -1.82
HOXB3-213ENST00000552000 CLN5O75503 358 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 PGLYRP1O75594 196 aaPredicted RBP3.69□□□□□ -1.82
HOXB3-213ENST00000552000 ATP5HO75947 161 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 HOXB5P09067 269 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 DNAH10OSP0CZ25 163 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 SNCAP37840 140 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 HOXA1P49639 335 aaPredicted RBP3.69□□□□□ -1.82
HOXB3-213ENST00000552000 RORCP51449 518 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 HERV-K104P61576 105 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 HSPE1P61604 102 aaKnown RBP3.69□□□□□ -1.82
HOXB3-213ENST00000552000 PSG9Q00887 426 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 GAMTQ14353 236 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 TRAM1Q15629 374 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 AARDQ4LEZ3 155 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 SIGLEC15Q6ZMC9 328 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 FOXI2Q6ZQN5 318 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 C8orf59Q8N0T1 100 aaPredicted RBP3.69□□□□□ -1.82
HOXB3-213ENST00000552000 CADM3Q8N126 398 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 OR4A16Q8NH70 328 aa3.69□□□□□ -1.82
HOXB3-213ENST00000552000 SAV1Q9H4B6 383 aaPredicted RBP3.69□□□□□ -1.82
HOXB3-213ENST00000552000 FNDC4Q9H6D8 234 aaPredicted RBP3.69□□□□□ -1.82
HOXB3-213ENST00000552000 S100A14Q9HCY8 104 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms