RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 RHOGP84095 191 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 PITPNAQ00169 270 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 WT1-ASQ06250 92 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 OR5I1Q13606 314 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 DEFB135Q30KP9 77 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 Q499Y3 187 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 C9orf129Q5T035 196 aaKnown RBP1.6□□□□□ -2.15
CPSF6-207ENST00000551516 C6orf183Q5T699 404 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 H2BFWTQ7Z2G1 175 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 FAM223AQ8IWN6 122 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 CCDC71LQ8N9Z2 235 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.6□□□□□ -2.15
CPSF6-207ENST00000551516 NECAP1Q8NC96 275 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 OR5AK2Q8NH90 309 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 TMEM167AQ8TBQ9 72 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 SRSF12Q8WXF0 261 aaKnown RBP1.6□□□□□ -2.15
CPSF6-207ENST00000551516 CCDC124Q96CT7 223 aaKnown RBP1.6□□□□□ -2.15
CPSF6-207ENST00000551516 C16orf74Q96GX8 76 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 UQCC2Q9BRT2 126 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 TMED9Q9BVK6 235 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 VSIRQ9H7M9 311 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 PLEKHA1Q9HB21 404 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 PLGRKTQ9HBL7 147 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 SPACA1Q9HBV2 294 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 MED4Q9NPJ6 270 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 KCNIP1Q9NZI2 227 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 METTL1Q9UBP6 276 aaKnown RBP1.6□□□□□ -2.15
CPSF6-207ENST00000551516 GLS2Q9UI32 602 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 AK3Q9UIJ7 227 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 CELA1Q9UNI1 258 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 WASHC3Q9Y3C0 194 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 LRRC42Q9Y546 428 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 MUC2Q02817 5179 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 TNXBP22105 4242 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 IGHV3OR16-13A0A075B7E8 117 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 LOC102724200A0A096LPH7 203 aaPredicted RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 A0A0G2JRQ6 117 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 A0A0J9YXY3 114 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF705FA8MVS1 300 aaPredicted RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 MCRIP1C9JLW8 97 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 I3L2K1 104 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 K7EMT4 169 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 ATP8B1O43520 1251 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 OR2J3O76001 311 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 IGHV3-48P01763 117 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 IFNA6P05013 189 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 CDK1P06493 297 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 GNAO1P09471 354 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF705DP0CH99 300 aaPredicted RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF705BP0CI00 300 aaPredicted RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 SRMP19623 302 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 TBPP20226 339 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 IL3RAP26951 378 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 DCKP27707 260 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 CEACAM6P40199 344 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 MNAT1P51948 309 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 HLA-DRB3P79483 266 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 TMEM267Q0VDI3 215 aaPredicted RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 MRPL28Q13084 256 aaKnown RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 TPBGQ13641 420 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 RSU1Q15404 277 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 YIF1BQ5BJH7 314 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 MORN3Q6PF18 240 aaPredicted RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF705AQ6ZN79 300 aaPredicted RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 Q6ZN92 141 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 IDO2Q6ZQW0 420 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 FAM220AQ7Z4H9 259 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 VKORC1L1Q8N0U8 176 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 CEND1Q8N111 149 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 CBR4Q8N4T8 237 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 ZFP41Q8N8Y5 198 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 ZNRF2Q8NHG8 242 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 GRPEL2Q8TAA5 225 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 DCANP1Q8TF63 244 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 GALMQ96C23 342 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 PECRQ9BY49 303 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 YTHDF1Q9BYJ9 559 aaKnown RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 MRPL36Q9P0J6 103 aaKnown RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 MRPL27Q9P0M9 148 aaKnown RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 SMPXQ9UHP9 88 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 TRAPPC2LQ9UL33 140 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 TP53TG3Q9ULZ0 132 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 ANAPC10Q9UM13 185 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 ING4Q9UNL4 249 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 KCNIP3Q9Y2W7 256 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 KLK5Q9Y337 293 aaPredicted RBP1.59□□□□□ -2.15
CPSF6-207ENST00000551516 AP4S1Q9Y587 144 aa1.59□□□□□ -2.15
CPSF6-207ENST00000551516 FAT4Q6V0I7 4981 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 INS-IGF2F8WCM5 200 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 DYNC1I1O14576 645 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 DEFB4AO15263 64 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 GGCTO75223 188 aaKnown RBP1.58□□□□□ -2.16
CPSF6-207ENST00000551516 DCTN3O75935 186 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 IGKV1-39P01597 117 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 IGKV1-17P01599 117 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 IGKV1D-39P04432 117 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 RPSAP08865 295 aaKnown RBP1.58□□□□□ -2.16
CPSF6-207ENST00000551516 OCM2P0CE71 109 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 APELAP0DMC3 54 aa1.58□□□□□ -2.16
CPSF6-207ENST00000551516 APOC4P55056 127 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms