RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SSX7Q7RTT5 188 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 FAM223AQ8IWN6 122 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 ZNF709Q8N972 641 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 NECAP1Q8NC96 275 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 RNF141Q8WVD5 230 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 RPRMQ9NS64 109 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 SLC39A9Q9NUM3 307 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 OR2T8A6NH00 312 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 ZNF705EA8MWA4 302 aaPredicted RBP6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 UMAD1C9J7I0 102 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 GNG7O60262 68 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 TSPAN15O95858 294 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 M6PRP20645 277 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 NPBWR1P48145 328 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 RAB5CP51148 216 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 RAB9AP51151 201 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 ATP5G2Q06055 141 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 Q56UQ5 140 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 Q6ZRG5 221 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 WFDC3Q8IUB2 231 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 RPP25LQ8N5L8 163 aaKnown RBP6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 FAM213BQ8TBF2 198 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 MYOZ3Q8TDC0 251 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 WIPF2Q8TF74 440 aaPredicted RBP6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 EEF1AKMT3Q96AZ1 226 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 RCC1LQ96I51 464 aaKnown RBP6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 TXN2Q99757 166 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 CHRDL1Q9BU40 450 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 C16orf95Q9H693 158 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 SLC25A22Q9H936 323 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 KCNIP2Q9NS61 270 aa6.26□□□□□ -1.41
DEPDC4-207ENST00000549249 NBEAL1Q6ZS30 2694 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 TRBV7-1A0A0A6YYK4 115 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 TMEM89A2RUT3 159 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 LINC00862A6NCI5 91 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 SEC14L6B5MCN3 397 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 TEX46H3BTG2 121 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 TCF21O43680 179 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 NDUFA7O95182 113 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 TOMM40O96008 361 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 TRBV12-3P01733 135 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 IGHV3-11P01762 117 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 CTSGP08311 255 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 PSG1P11464 419 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 GPR183P32249 361 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 PLP1P60201 277 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 SELENOTP62341 195 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 FOXE3Q13461 319 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 RAB31Q13636 194 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 ACOT6Q3I5F7 207 aaPredicted RBP6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 PXDC1Q5TGL8 231 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 SPATA31B1PQ5VZV4 182 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 ZNF343Q6P1L6 599 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 FAM122CQ6P4D5 195 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 SPSB3Q6PJ21 355 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 CLEC19AQ6UXS0 136 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 DPPA3Q6W0C5 159 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 RNF152Q8N8N0 203 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 OR10G4Q8NGN3 311 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 OR10G9Q8NGN4 311 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 OR10G7Q8NGN6 311 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 LYPD6BQ8NI32 183 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 LRRC20Q8TCA0 184 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 SAT2Q96F10 170 aaPredicted RBP6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 USMG5Q96IX5 58 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 JMJD8Q96S16 334 aa6.25□□□□□ -1.41
DEPDC4-207ENST00000549249 MXRA5Q9NR99 2828 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 TRAV30A0A087WSZ9 112 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 WI2-2373I1.2A0A1W2PRP0 233 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 PPP5D1E7EU14 171 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 PF4P02776 101 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 CLEC3BP05452 202 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 CRYBA1P05813 215 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 ELANEP08246 267 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 OR5G3P0C626 314 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 CDC34P49427 236 aaPredicted RBP6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 RAB14P61106 215 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 YPEL3P61236 119 aaPredicted RBP6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 SLC35B1P78383 322 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 BLOC1S1P78537 153 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 ZNF616Q08AN1 781 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 TCTEX1D4Q5JR98 221 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 MORN5Q5VZ52 161 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 HIST2H2BDQ6DRA6 164 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 TEX38Q6PEX7 206 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 PATE2Q6UY27 113 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 KLHDC1Q8N7A1 406 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 ZNF491Q8N8L2 437 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 LINC01006Q8NI28 216 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 MBD3L1Q8WWY6 194 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 TMEM37Q8WXS4 190 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 RAB24Q969Q5 203 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 ATP6V0BQ99437 205 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 GNB4Q9HAV0 340 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 DOK5Q9P104 306 aa6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 FBN1P35555 2871 aaKnown RBP6.24□□□□□ -1.41
DEPDC4-207ENST00000549249 IGHV3-35A0A0C4DH35 117 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 CTXND1A0A1B0GTU2 59 aa6.23□□□□□ -1.41
DEPDC4-207ENST00000549249 A0A1B0GV50 99 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 229.9 ms