RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 IGLV2-23P01705 113 aa11.37□□□□□ -0.59
RAPGEF3-218ENST00000548919 PRB3Q04118 309 aaPredicted RBP11.37□□□□□ -0.59
RAPGEF3-218ENST00000548919 URB1-AS1Q96HZ7 61 aa11.37□□□□□ -0.59
RAPGEF3-218ENST00000548919 EPDR1Q9UM22 224 aa11.37□□□□□ -0.59
RAPGEF3-218ENST00000548919 FTH1P19P0C7X4 201 aa11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 HIST1H1EP10412 219 aaKnown RBP11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 MYCNOSP40205 109 aa11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 RASL11AQ6T310 242 aa11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 LYPD2Q6UXB3 125 aa11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 KLHDC1Q8N7A1 406 aa11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 RBM14Q96PK6 669 aaKnown RBP11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 C2orf70A6NJV1 201 aa11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 PRB4P10163 310 aaPredicted RBP11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 IGLL1P15814 213 aa11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 DLX1P56177 255 aa11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 UNQ5815/PRO19632Q6UWF5 114 aa11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 ZADH2Q8N4Q0 377 aa11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 GSX1Q9H4S2 264 aaPredicted RBP11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 PIEZO2Q9H5I5 2752 aa11.36□□□□□ -0.59
RAPGEF3-218ENST00000548919 ENSAO43768 121 aaKnown RBP11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 KLF5Q13887 457 aaPredicted RBP11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 OR8B3Q8NGG8 313 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 ST6GALNAC6Q969X2 333 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 OR8B2Q96RD0 313 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 SSUH2Q9Y2M2 353 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 LRBAP50851 2863 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 GVINP1Q7Z2Y8 2422 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 FAM87AP0C7U9 286 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 TMEM30BQ3MIR4 351 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 C1orf185Q5T7R7 199 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 Q71RC1 249 aaPredicted RBP11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 THAP8Q8NA92 274 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 GTSF1Q8WW33 167 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 CCL17Q92583 94 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 PGLYRP4Q96LB8 373 aa11.35□□□□□ -0.59
RAPGEF3-218ENST00000548919 TTC28Q96AY4 2481 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 TRAV9-2A0A087WT02 112 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 A0A1B0GXF2 115 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 CRYABP02511 175 aaKnown RBP11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 ZNF137PP52743 207 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 SUB1P53999 127 aaKnown RBP eCLIP11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 LINC00173Q6ZV60 143 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 SSX8Q7RTT4 187 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 OTOGLQ3ZCN5 2332 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 K7EM74 188 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 OR2J3O76001 311 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 TOX4O94842 621 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 MRGPRG-AS1Q2M3A8 158 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 ANKRD11Q6UB99 2663 aaPredicted RBP11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 CUL9Q8IWT3 2517 aa11.34□□□□□ -0.59
RAPGEF3-218ENST00000548919 INS-IGF2F8WCM5 200 aa11.33□□□□□ -0.59
RAPGEF3-218ENST00000548919 NBEAP1P0C6P0 100 aa11.33□□□□□ -0.59
RAPGEF3-218ENST00000548919 WFDC8Q8IUA0 241 aa11.33□□□□□ -0.59
RAPGEF3-218ENST00000548919 VSTM2AQ8TAG5 236 aa11.33□□□□□ -0.59
RAPGEF3-218ENST00000548919 WASHC3Q9Y3C0 194 aa11.33□□□□□ -0.59
RAPGEF3-218ENST00000548919 DCHS2Q6V1P9 2916 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 CNTFRP26992 372 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 MEF2CQ06413 473 aaPredicted RBP11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 ADIPOQQ15848 244 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 C3orf36Q3SXR2 165 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 PERPQ96FX8 193 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 GPR82Q96P67 336 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 RPP21Q9H633 154 aaKnown RBP11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 TRAV8-1A0A0A6YYK1 113 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 C17orf100A8MU93 164 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 CCL25O15444 150 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 SFTPCP11686 197 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 TNFRSF1AP19438 455 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 HBBP68871 147 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 C21orf62-AS1Q17RA5 79 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 FAM120AOSQ5T036 256 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 MLST8Q9BVC4 326 aa11.33□□□□□ -0.6
RAPGEF3-218ENST00000548919 TPRP12270 2363 aaKnown RBP11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 IGLC7A0M8Q6 106 aa11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 ZNF835Q9Y2P0 537 aa11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 IGHV2-26A0A0B4J1V2 119 aa11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 ZNF138P52744 262 aa11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 OR4F17Q8NGA8 305 aa11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 OR4A5Q8NH83 315 aa11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 ZNF596Q8TC21 504 aa11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 CHRDL1Q9BU40 450 aa11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 MCRIP2Q9BUT9 160 aaKnown RBP11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 CTSZQ9UBR2 303 aa11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 KLF12Q9Y4X4 402 aa11.32□□□□□ -0.6
RAPGEF3-218ENST00000548919 ZGRF1Q86YA3 2104 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 PPIAL4EA0A075B759 164 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 C20orf202A1L168 122 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 PPIAL4DF5H284 164 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 P01737 135 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 PPIAL4FP0DN26 164 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 ATP5L2Q7Z4Y8 100 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 TMEM186Q96B77 213 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 ASCL2Q99929 193 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 Q9H3A6 140 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 PPP1R14DQ9NXH3 145 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 MRPS16Q9Y3D3 137 aaKnown RBP11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 IGHV1-24A0A0C4DH33 117 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 CEACAM4O75871 244 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 GP9P14770 177 aa11.31□□□□□ -0.6
RAPGEF3-218ENST00000548919 PTTG1IPP53801 180 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms