RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 EVC2Q86UK5 1308 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 VIRMAQ69YN4 1812 aaKnown RBP0.41□□□□□ -2.34
CCDC38-206ENST00000548771 ACACBO00763 2458 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 PTPRGP23470 1445 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 FMN1Q68DA7 1419 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 UACAQ9BZF9 1416 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 IQGAP1P46940 1657 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 QRICH2Q9H0J4 1663 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 LAMA1P25391 3075 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 A0A0D9SG52 128 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 CLDN25C9JDP6 229 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 LRRN3E7EW58 273 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 SLC16A4O15374 487 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 OR2T1O43869 369 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 OR1I1O60431 355 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 DEXIO95424 95 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 TCL1AP56279 114 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 RAB4BP61018 213 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 SPANXN5Q5MJ07 72 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 DEFB128Q7Z7B8 93 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 CLVS1Q8IUQ0 354 aaPredicted RBP0.41□□□□□ -2.34
CCDC38-206ENST00000548771 TMEM156Q8N614 296 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 DNAJC9Q8WXX5 260 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 OPTNQ96CV9 577 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 TMEM147Q9BVK8 224 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 ULBP3Q9BZM4 244 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 OR51I1Q9H343 314 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 OTOGQ6ZRI0 2925 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 CELSR2Q9HCU4 2923 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 LMTK2Q8IWU2 1503 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 DEPDC5O75140 1603 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 RALGAPA2Q2PPJ7 1873 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 ABCA9Q8IUA7 1624 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 CMYA5Q8N3K9 4069 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 COL24A1Q17RW2 1714 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 A2ML1A8K2U0 1454 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 MYOM2P54296 1465 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 NEO1Q92859 1461 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 PKD1L1Q8TDX9 2849 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 DIP2CQ9Y2E4 1556 aa0.4□□□□□ -2.34
CCDC38-206ENST00000548771 LRBAP50851 2863 aa0.4□□□□□ -2.34
CCDC38-206ENST00000548771 KDM5AP29375 1690 aaKnown RBP0.4□□□□□ -2.34
CCDC38-206ENST00000548771 COL4A5P29400 1685 aa0.4□□□□□ -2.34
CCDC38-206ENST00000548771 C9orf84Q5VXU9 1444 aa0.4□□□□□ -2.34
CCDC38-206ENST00000548771 FAT4Q6V0I7 4981 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 EFCAB5A4FU69 1503 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 ATP7AQ04656 1500 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 KCPQ6ZWJ8 1503 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 ASXL1Q8IXJ9 1541 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 ABCA10Q8WWZ4 1543 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 POLQO75417 2590 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 SETD2Q9BYW2 2564 aaPredicted RBP0.4□□□□□ -2.35
CCDC38-206ENST00000548771 NBEAL1Q6ZS30 2694 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 CASP8AP2Q9UKL3 1982 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 PAPPAQ13219 1627 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 ABCA6Q8N139 1617 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 C2orf70A6NJV1 201 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 GOLGA6L19H0YKK7 550 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 C19orf84I3L1E1 186 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 CTSDP07339 412 aaPredicted RBP0.4□□□□□ -2.35
CCDC38-206ENST00000548771 HBA1P69905 142 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 PMAIP1Q13794 54 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 KHDC3LQ587J8 217 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 HIST2H3PS2Q5TEC6 136 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 GDF5OSQ5U4N7 250 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 Q6ZS49 121 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 OR5A1Q8NGJ0 315 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 PFN4Q8NHR9 129 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 MRPL30Q8TCC3 161 aaKnown RBP0.4□□□□□ -2.35
CCDC38-206ENST00000548771 ZNF418Q8TF45 676 aaPredicted RBP0.4□□□□□ -2.35
CCDC38-206ENST00000548771 KLK6Q92876 244 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 USE1Q9NZ43 259 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 LSM5Q9Y4Y9 91 aaKnown RBP0.4□□□□□ -2.35
CCDC38-206ENST00000548771 UTP20O75691 2785 aaKnown RBP0.4□□□□□ -2.35
CCDC38-206ENST00000548771 NCOR1O75376 2440 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 RGPD1P0DJD0 1748 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 SUPT6HQ7KZ85 1726 aaKnown RBP0.4□□□□□ -2.35
CCDC38-206ENST00000548771 TNRC6BQ9UPQ9 1833 aaKnown RBP0.4□□□□□ -2.35
CCDC38-206ENST00000548771 PZPP20742 1482 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 NCOA2Q15596 1464 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 VWFP04275 2813 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 SAMD9LQ8IVG5 1584 aa0.4□□□□□ -2.35
CCDC38-206ENST00000548771 TRRAPQ9Y4A5 3859 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 FAM208BQ5VWN6 2430 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 CEP250Q9BV73 2442 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 FHAD1B1AJZ9 1412 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 FLNAP21333 2647 aaKnown RBP0.39□□□□□ -2.35
CCDC38-206ENST00000548771 IGSF10Q6WRI0 2623 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 AGLP35573 1532 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 DUOX2Q9NRD8 1548 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 TULP4Q9NRJ4 1543 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 FRAS1Q86XX4 4008 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 AKAP13Q12802 2813 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 KIF14Q15058 1648 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 PRDM2Q13029 1718 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 ABCA3Q99758 1704 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 PEAK1Q9H792 1746 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 KIAA1551Q9HCM1 1747 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 HECTD4Q9Y4D8 3996 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 TRBV6-8A0A0A6YYG3 113 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms