RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 NUP35Q8NFH5 326 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 SERTAD4Q9NUC0 356 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 AMMECR1Q9Y4X0 333 aaPredicted RBP13.82□□□□□ -0.2
LETMD1-210ENST00000547555 KLF12Q9Y4X4 402 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 PLCE1Q9P212 2302 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 IGHV3-43A0A0B4J1X8 118 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 WNT9BO14905 357 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 CD3EP07766 207 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 FRMD6-AS1P0C7T7 363 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 IGHV3-43DP0DP04 118 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 MGST1P10620 155 aaKnown RBP13.82□□□□□ -0.2
LETMD1-210ENST00000547555 NTF3P20783 257 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 HINT1P49773 126 aaPredicted RBP13.82□□□□□ -0.2
LETMD1-210ENST00000547555 MFAP2P55001 183 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 KIAA1644Q3SXP7 199 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 CD177Q8N6Q3 437 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 WNT10AQ9GZT5 417 aa13.82□□□□□ -0.2
LETMD1-210ENST00000547555 RAI1Q7Z5J4 1906 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-210ENST00000547555 SHISA9B4DS77 424 aa13.81□□□□□ -0.2
LETMD1-210ENST00000547555 CD5LO43866 347 aa13.81□□□□□ -0.2
LETMD1-210ENST00000547555 TIMM8AO60220 97 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-210ENST00000547555 ALKBH6Q3KRA9 238 aa13.81□□□□□ -0.2
LETMD1-210ENST00000547555 SLC25A34Q6PIV7 304 aa13.81□□□□□ -0.2
LETMD1-210ENST00000547555 OR4A5Q8NH83 315 aa13.81□□□□□ -0.2
LETMD1-210ENST00000547555 RFESDQ8TAC1 157 aa13.81□□□□□ -0.2
LETMD1-210ENST00000547555 FAM167A-AS1Q96KT0 104 aa13.81□□□□□ -0.2
LETMD1-210ENST00000547555 NDFIP1Q9BT67 221 aa13.81□□□□□ -0.2
LETMD1-210ENST00000547555 CALYQ9NYX4 217 aa13.81□□□□□ -0.2
LETMD1-210ENST00000547555 TRAV3A0A0B4J244 114 aa13.8□□□□□ -0.2
LETMD1-210ENST00000547555 A8MWL6 223 aa13.8□□□□□ -0.2
LETMD1-210ENST00000547555 LIPFP07098 398 aa13.8□□□□□ -0.2
LETMD1-210ENST00000547555 EBLN2Q6P2I7 272 aa13.8□□□□□ -0.2
LETMD1-210ENST00000547555 LRRC29Q8WV35 223 aa13.8□□□□□ -0.2
LETMD1-210ENST00000547555 FAM234AQ9H0X4 552 aa13.8□□□□□ -0.2
LETMD1-210ENST00000547555 GCM1Q9NP62 436 aa13.8□□□□□ -0.2
LETMD1-210ENST00000547555 PEX7O00628 323 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 HBBP68871 147 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 FXYD3Q14802 87 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 UNQ5815/PRO19632Q6UWF5 114 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 ZNF826PQ6ZT77 177 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 FAM19A2Q8N3H0 131 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 NUP37Q8NFH4 326 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 NUDT10Q8NFP7 164 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 OSR1Q8TAX0 266 aaPredicted RBP13.79□□□□□ -0.2
LETMD1-210ENST00000547555 NUDT11Q96G61 164 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 KBTBD11-OT1A0A1B0GTJ5 212 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 A0A1W2PPR1 153 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 K7ERU9 68 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 PLAUP00749 431 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 UBE2L3P68036 154 aaKnown RBP13.79□□□□□ -0.2
LETMD1-210ENST00000547555 ERHP84090 104 aaKnown RBP13.79□□□□□ -0.2
LETMD1-210ENST00000547555 PSMG4Q5JS54 123 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 SPATA12Q7Z6I5 190 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 HSPB8Q9UJY1 196 aa13.79□□□□□ -0.2
LETMD1-210ENST00000547555 HRNRQ86YZ3 2850 aaPredicted RBP13.78□□□□□ -0.2
LETMD1-210ENST00000547555 ROS1P08922 2347 aa13.78□□□□□ -0.2
LETMD1-210ENST00000547555 OR4C46A6NHA9 309 aa13.78□□□□□ -0.2
LETMD1-210ENST00000547555 SYS1-DBNDD2H3BUS1 97 aa13.78□□□□□ -0.2
LETMD1-210ENST00000547555 ACTL6BO94805 426 aa13.78□□□□□ -0.2
LETMD1-210ENST00000547555 RNASE2P10153 161 aaKnown RBP13.78□□□□□ -0.2
LETMD1-210ENST00000547555 MYCNOSP40205 109 aa13.78□□□□□ -0.2
LETMD1-210ENST00000547555 SUB1P53999 127 aaKnown RBP eCLIP13.78□□□□□ -0.23e-10■■■■■ 44.4
LETMD1-210ENST00000547555 HIST1H1AQ02539 215 aaPredicted RBP13.78□□□□□ -0.2
LETMD1-210ENST00000547555 RPL39P5Q59GN2 51 aa13.78□□□□□ -0.2
LETMD1-210ENST00000547555 FAM71F2Q6NXP2 309 aa13.78□□□□□ -0.2
LETMD1-210ENST00000547555 SLC25A2Q9BXI2 301 aa13.78□□□□□ -0.2
LETMD1-210ENST00000547555 PRSS22Q9GZN4 317 aa13.78□□□□□ -0.2
LETMD1-210ENST00000547555 C7orf69Q9H7B7 122 aa13.78□□□□□ -0.2
LETMD1-210ENST00000547555 DCHS2Q6V1P9 2916 aa13.78□□□□□ -0.2
LETMD1-210ENST00000547555 A0A1B0GW15 77 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 C3orf80F5H4A9 247 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 TCL1AP56279 114 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 SEC11AP67812 179 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 VAMP3Q15836 100 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 C21orf62-AS1Q17RA5 79 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 ZNF672Q499Z4 452 aaPredicted RBP13.77□□□□□ -0.21
LETMD1-210ENST00000547555 Q56UQ5 140 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 ZNF329Q86UD4 541 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 THAP8Q8NA92 274 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 GPR82Q96P67 336 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 PAXXQ9BUH6 204 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 METRNQ9UJH8 293 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 CRYBG3Q68DQ2 2970 aa13.77□□□□□ -0.21
LETMD1-210ENST00000547555 IGKV1D-17A0A075B6S4 117 aa13.76□□□□□ -0.21
LETMD1-210ENST00000547555 CEACAM3P40198 252 aa13.76□□□□□ -0.21
LETMD1-210ENST00000547555 ZNF134P52741 427 aa13.76□□□□□ -0.21
LETMD1-210ENST00000547555 LINC00205P59089 165 aa13.76□□□□□ -0.21
LETMD1-210ENST00000547555 ARF6P62330 175 aa13.76□□□□□ -0.21
LETMD1-210ENST00000547555 HIST2H2BCQ6DN03 193 aa13.76□□□□□ -0.21
LETMD1-210ENST00000547555 FAM53AQ6NSI3 398 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-210ENST00000547555 OR2Z1Q8NG97 314 aa13.76□□□□□ -0.21
LETMD1-210ENST00000547555 PEF1Q9UBV8 284 aaKnown RBP13.76□□□□□ -0.21
LETMD1-210ENST00000547555 DSCAML1Q8TD84 2053 aa13.76□□□□□ -0.21
LETMD1-210ENST00000547555 IGKV1OR2-108A0A075B7D4 117 aa13.75□□□□□ -0.21
LETMD1-210ENST00000547555 TRBV6-1A0A0K0K1D8 114 aa13.75□□□□□ -0.21
LETMD1-210ENST00000547555 HIGD1CA8MV81 97 aa13.75□□□□□ -0.21
LETMD1-210ENST00000547555 E7EQL1 145 aa13.75□□□□□ -0.21
LETMD1-210ENST00000547555 SPINK4O60575 86 aa13.75□□□□□ -0.21
LETMD1-210ENST00000547555 LEPROTL1O95214 131 aa13.75□□□□□ -0.21
LETMD1-210ENST00000547555 LHBP01229 141 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms