RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 HBBP68871 147 aa11.69□□□□□ -0.54
LETMD1-209ENST00000547318 TCF15Q12870 199 aa11.69□□□□□ -0.54
LETMD1-209ENST00000547318 Q8N976 141 aa11.69□□□□□ -0.54
LETMD1-209ENST00000547318 LINC00479Q96M42 142 aa11.69□□□□□ -0.54
LETMD1-209ENST00000547318 HIGD1CA8MV81 97 aa11.68□□□□□ -0.54
LETMD1-209ENST00000547318 TCRAP04437 139 aa11.68□□□□□ -0.54
LETMD1-209ENST00000547318 SLC35B1P78383 322 aa11.68□□□□□ -0.54
LETMD1-209ENST00000547318 SLAQ13239 276 aa11.68□□□□□ -0.54
LETMD1-209ENST00000547318 FBXL19-AS1Q494R0 122 aa11.68□□□□□ -0.54
LETMD1-209ENST00000547318 SPACA3Q8IXA5 215 aa11.68□□□□□ -0.54
LETMD1-209ENST00000547318 LYPD1Q8N2G4 141 aa11.68□□□□□ -0.54
LETMD1-209ENST00000547318 RPEQ96AT9 228 aa11.68□□□□□ -0.54
LETMD1-209ENST00000547318 CADP27708 2225 aa11.68□□□□□ -0.54
LETMD1-209ENST00000547318 C19orf71A6NCJ1 209 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 TEX22C9J3V5 150 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 HSBP1O75506 76 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 MOSP00540 346 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 P01737 135 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 PMCHP20382 165 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 CTRLP40313 264 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 KIAA1644Q3SXP7 199 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 HCP5Q6MZN7 132 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 NIT1Q86X76 327 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 NHLRC2Q8NBF2 726 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 FAM168AQ92567 244 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 DAZAP1Q96EP5 407 aaKnown RBP11.67□□□□□ -0.54
LETMD1-209ENST00000547318 RCHY1Q96PM5 261 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 ALKBH7Q9BT30 221 aaPredicted RBP11.67□□□□□ -0.54
LETMD1-209ENST00000547318 FAM103A1Q9BTL3 118 aaKnown RBP11.67□□□□□ -0.54
LETMD1-209ENST00000547318 Q9H3A6 140 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 UQCR10Q9UDW1 63 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 PAM16Q9Y3D7 125 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 TRAV34A0A0B4J273 112 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 NPIPB6E9PJ23 425 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 COL8A2P25067 703 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 ZNF841Q6ZN19 808 aa11.67□□□□□ -0.54
LETMD1-209ENST00000547318 SSBP3Q9BWW4 388 aaPredicted RBP11.67□□□□□ -0.54
LETMD1-209ENST00000547318 BDP1A6H8Y1 2624 aa11.66□□□□□ -0.54
LETMD1-209ENST00000547318 CA1P00915 261 aaPredicted RBP11.66□□□□□ -0.54
LETMD1-209ENST00000547318 C3orf79P0CE67 100 aa11.66□□□□□ -0.54
LETMD1-209ENST00000547318 IGLC1P0CG04 106 aa11.66□□□□□ -0.54
LETMD1-209ENST00000547318 SRSF12Q8WXF0 261 aaKnown RBP11.66□□□□□ -0.54
LETMD1-209ENST00000547318 CHCHD1Q96BP2 118 aaKnown RBP11.66□□□□□ -0.54
LETMD1-209ENST00000547318 SCNM1Q9BWG6 230 aa11.66□□□□□ -0.54
LETMD1-209ENST00000547318 PPIAL4CA0A0B4J2A2 164 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 LY6LH3BQJ8 138 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 PPIAL4GP0DN37 164 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 HOXB4P17483 251 aaPredicted RBP11.65□□□□□ -0.54
LETMD1-209ENST00000547318 PRR27Q6MZM9 219 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 RBPMS2Q6ZRY4 209 aaKnown RBP11.65□□□□□ -0.54
LETMD1-209ENST00000547318 OR8B3Q8NGG8 313 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 BLNKQ8WV28 456 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 RITA1Q96K30 269 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 OR8B2Q96RD0 313 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 RASL11BQ9BPW5 248 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 C1RLQ9NZP8 487 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 TNCP24821 2201 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 CUL9Q8IWT3 2517 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 URB1O60287 2271 aaKnown RBP11.65□□□□□ -0.54
LETMD1-209ENST00000547318 ZNF318Q5VUA4 2279 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 A0A1B0GW15 77 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 I3L2K1 104 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 K7EQM0 130 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 GNG5P63218 68 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 GAGE1Q13065 139 aa11.65□□□□□ -0.54
LETMD1-209ENST00000547318 TRAV30A0A087WSZ9 112 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.64□□□□□ -0.55
LETMD1-209ENST00000547318 LIPFP07098 398 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 CEACAM3P40198 252 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 SPATA45Q537H7 98 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 LY6G5BQ8NDX9 201 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 PRSS33Q8NF86 280 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 SLC25A39Q9BZJ4 359 aaPredicted RBP11.64□□□□□ -0.55
LETMD1-209ENST00000547318 RAB1BQ9H0U4 201 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 ZFP30Q9Y2G7 519 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 IGHV3-72A0A0B4J1Y9 119 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 PLAUP00749 431 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 IGHV3-48P01763 117 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 CD33P20138 364 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 BTF3P20290 206 aaKnown RBP11.64□□□□□ -0.55
LETMD1-209ENST00000547318 FOXA3P55318 350 aaPredicted RBP11.64□□□□□ -0.55
LETMD1-209ENST00000547318 Q86TA4 180 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 BPIFA4PQ86YQ2 179 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 ARL6IP6Q8N6S5 226 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 TMEM75Q8N9X5 138 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 ZNF48Q96MX3 618 aaPredicted RBP11.64□□□□□ -0.55
LETMD1-209ENST00000547318 SH3BGRL2Q9UJC5 107 aa11.64□□□□□ -0.55
LETMD1-209ENST00000547318 K7ENP7 123 aa11.63□□□□□ -0.55
LETMD1-209ENST00000547318 PSG1P11464 419 aa11.63□□□□□ -0.55
LETMD1-209ENST00000547318 Q6AWC8 147 aa11.63□□□□□ -0.55
LETMD1-209ENST00000547318 C16orf54Q6UWD8 224 aa11.63□□□□□ -0.55
LETMD1-209ENST00000547318 MUC15Q8N387 334 aa11.63□□□□□ -0.55
LETMD1-209ENST00000547318 OR4F17Q8NGA8 305 aa11.63□□□□□ -0.55
LETMD1-209ENST00000547318 OR11H6Q8NGC7 330 aa11.63□□□□□ -0.55
LETMD1-209ENST00000547318 COL6A3P12111 3177 aa11.62□□□□□ -0.55
LETMD1-209ENST00000547318 SERTM2A0A1B0GWG4 89 aa11.62□□□□□ -0.55
LETMD1-209ENST00000547318 FAM181BA6NEQ2 426 aa11.62□□□□□ -0.55
LETMD1-209ENST00000547318 M0R2Z0 102 aa11.62□□□□□ -0.55
LETMD1-209ENST00000547318 OR5AL1P0C617 328 aa11.62□□□□□ -0.55
LETMD1-209ENST00000547318 FAM87AP0C7U9 286 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms