RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 POM121L12Q8N7R1 296 aa6.75□□□□□ -1.33
SSH1-205ENST00000546812 PINX1Q96BK5 328 aaKnown RBP6.75□□□□□ -1.33
SSH1-205ENST00000546812 HRH4Q9H3N8 390 aa6.75□□□□□ -1.33
SSH1-205ENST00000546812 RCL1Q9Y2P8 373 aaKnown RBP6.75□□□□□ -1.33
SSH1-205ENST00000546812 IFNA10P01566 189 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 IGHV3-48P01763 117 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 MBPP02686 304 aaPredicted RBP6.74□□□□□ -1.33
SSH1-205ENST00000546812 ELLP55199 621 aaPredicted RBP6.74□□□□□ -1.33
SSH1-205ENST00000546812 H2BFSP57053 126 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 POLR2GP62487 172 aaKnown RBP eCLIP6.74□□□□□ -1.33
SSH1-205ENST00000546812 FCN2Q15485 313 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 KLK9Q2XQG4 91 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 PVRIGQ6DKI7 326 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 TMEM170AQ8WVE7 144 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 EEF1AKMT3Q96AZ1 226 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 C2orf50Q96LR7 162 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 MED28Q9H204 178 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 THYN1Q9P016 225 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 KLK9Q9UKQ9 250 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 UFC1Q9Y3C8 167 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 LSM5Q9Y4Y9 91 aaKnown RBP6.74□□□□□ -1.33
SSH1-205ENST00000546812 DNAH5Q8TE73 4624 aa6.74□□□□□ -1.33
SSH1-205ENST00000546812 TRAV10A0A0B4J240 114 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 OR4C46A6NHA9 309 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 C15orf62A8K5M9 175 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 I3L2K1 104 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 K7EIM0 57 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 K7EPK0 472 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 MT-CO2P00403 227 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 CLEC3BP05452 202 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 P0DMU3 169 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 FAM231AP0DMU4 169 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 FAM231CP0DMU5 169 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 CXCL3P19876 107 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 OPRK1P41145 380 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 SUB1P53999 127 aaKnown RBP eCLIP6.73□□□□□ -1.33
SSH1-205ENST00000546812 ID3Q02535 119 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 LRRC37A5PQ49AS3 106 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 C2orf83Q53S99 150 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 LAMTOR1Q6IAA8 161 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 APRG1Q8IVJ8 170 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 Q8N1X5 172 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 OR11H7Q8NGC8 314 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 ZNF502Q8TBZ5 544 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 CIB3Q96Q77 187 aaPredicted RBP6.73□□□□□ -1.33
SSH1-205ENST00000546812 RNF126Q9BV68 326 aa6.73□□□□□ -1.33
SSH1-205ENST00000546812 PAIP2BQ9ULR5 123 aaKnown RBP6.73□□□□□ -1.33
SSH1-205ENST00000546812 L7N2F9 121 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 CORTO00230 105 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 TMEM50AO95807 157 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 HLA-DMBP28068 263 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 GPR183P32249 361 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 RRAS2P62070 204 aaPredicted RBP6.72□□□□□ -1.33
SSH1-205ENST00000546812 VAMP2P63027 116 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 RAB32Q13637 225 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 Q56UQ5 140 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 SPANXN5Q5MJ07 72 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 UBAC2Q8NBM4 344 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 VN1R17PQ8TDU5 208 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 SCARB1Q8WTV0 552 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 CXorf58Q96LI9 332 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 NMES1Q9C002 83 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 C21orf62Q9NYP8 219 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 PSENENQ9NZ42 101 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 UBR4Q5T4S7 5183 aa6.72□□□□□ -1.33
SSH1-205ENST00000546812 TRBV7-1A0A0A6YYK4 115 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 OR2T8A6NH00 312 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 C16orf90A8MZG2 172 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 F8W735 103 aaPredicted RBP6.71□□□□□ -1.34
SSH1-205ENST00000546812 CCNKO75909 580 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 PAX9P55771 341 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 CMC4P56277 68 aaPredicted RBP6.71□□□□□ -1.34
SSH1-205ENST00000546812 IL15RAQ13261 267 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 SOHLH1Q5JUK2 328 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 Q6ZR54 194 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 Q6ZTC4 211 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 NOXA1Q86UR1 476 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 Q8NAQ8 132 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 RNASEH2CQ8TDP1 164 aaKnown RBP6.71□□□□□ -1.34
SSH1-205ENST00000546812 SMIM8Q96KF7 97 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 RAB40CQ96S21 281 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 FNDC4Q9H6D8 234 aaPredicted RBP6.71□□□□□ -1.34
SSH1-205ENST00000546812 OR5AC2Q9NZP5 309 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 MRPL36Q9P0J6 103 aaKnown RBP6.71□□□□□ -1.34
SSH1-205ENST00000546812 STRAPQ9Y3F4 350 aaKnown RBP6.71□□□□□ -1.34
SSH1-205ENST00000546812 U3KQ87 197 aa6.71□□□□□ -1.34
SSH1-205ENST00000546812 IGHV3-35A0A0C4DH35 117 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 RPS10-NUDT3A0A1W2PQS6 291 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 TGOLN2O43493 480 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 TSC22D2O75157 780 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 AMBPP02760 352 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 METTL15P1P0C7V9 234 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 BCAP31P51572 246 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 RND2P52198 227 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 MFAP4P55083 255 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 RAB11AP62491 216 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 RPP30P78346 268 aaKnown RBP6.7□□□□□ -1.34
SSH1-205ENST00000546812 ZNF124Q15973 351 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 MLANAQ16655 118 aa6.7□□□□□ -1.34
SSH1-205ENST00000546812 OR8G2PQ6IF36 304 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms