RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ZNF436Q9C0F3 470 aaPredicted RBP4.85□□□□□ -1.63
PRKDC-211ENST00000546304 C11orf1Q9H5F2 150 aa4.85□□□□□ -1.63
PRKDC-211ENST00000546304 ZC4H2Q9NQZ6 224 aa4.85□□□□□ -1.63
PRKDC-211ENST00000546304 LYRM2Q9NU23 88 aaPredicted RBP4.85□□□□□ -1.63
PRKDC-211ENST00000546304 GAR1Q9NY12 217 aaKnown RBP4.85□□□□□ -1.63
PRKDC-211ENST00000546304 PSENENQ9NZ42 101 aa4.85□□□□□ -1.63
PRKDC-211ENST00000546304 MRPL36Q9P0J6 103 aaKnown RBP4.85□□□□□ -1.63
PRKDC-211ENST00000546304 MBD2Q9UBB5 411 aa4.85□□□□□ -1.63
PRKDC-211ENST00000546304 MEGF8Q7Z7M0 2845 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 E5RGE8 158 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 H0YIZ8 118 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 NUPL2O15504 423 aaKnown RBP4.84□□□□□ -1.63
PRKDC-211ENST00000546304 GNG7O60262 68 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 GGCTO75223 188 aaKnown RBP4.84□□□□□ -1.63
PRKDC-211ENST00000546304 CCNKO75909 580 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 MPC2O95563 127 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 CLEC3BP05452 202 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 BCAP31P51572 246 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 MFAP4P55083 255 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 RAP2BP61225 183 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 OR8G2PQ6IF36 304 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 PRSS54Q6PEW0 395 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 Q6ZNX1 250 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 TMEM116Q8NCL8 245 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 CACNG8Q8WXS5 425 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 TMEM190Q8WZ59 177 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 DCUN1D4Q92564 292 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 ACY3Q96HD9 319 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 SLC35E1Q96K37 410 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 TXN2Q99757 166 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 OR5AC2Q9NZP5 309 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 FBN3Q75N90 2809 aa4.84□□□□□ -1.63
PRKDC-211ENST00000546304 PRKDCP78527 4128 aaKnown RBP4.84□□□□□ -1.64
PRKDC-211ENST00000546304 TRAV14DV4A0A0A6YYC5 116 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 IGHV3-35A0A0C4DH35 117 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 IGSF23A1L1A6 192 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 SMCO3A2RU48 225 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 FAM24AA6NFZ4 105 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 PMS2P5A8MQ11 134 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 A8MWP6 167 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 OVOL1O14753 267 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 CLN5O75503 358 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 CST7O76096 145 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 IGKV1-17P01599 117 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 RLN2P04090 185 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 IGLC1P0CG04 106 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 OR10J1P30954 320 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 GPX4P36969 197 aaPredicted RBP4.83□□□□□ -1.64
PRKDC-211ENST00000546304 P2RY1P47900 373 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 SULT1A1P50225 295 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 SYNJ2BPP57105 145 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 DLK1P80370 383 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 EWSR1Q01844 656 aaKnown RBP eCLIP4.83□□□□□ -1.64
PRKDC-211ENST00000546304 AKR1C1Q04828 323 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 RELQ04864 619 aaPredicted RBP4.83□□□□□ -1.64
PRKDC-211ENST00000546304 BAXQ07812 192 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 SLC38A11Q08AI6 406 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 HAPLN4Q86UW8 402 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 TMEM252Q8N6L7 170 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 TMEM217Q8N7C4 229 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 OR10P1Q8NGE3 313 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 OR2T35Q8NGX2 323 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 DLX4Q92988 240 aaPredicted RBP4.83□□□□□ -1.64
PRKDC-211ENST00000546304 NEU1Q99519 415 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 CHRDL1Q9BU40 450 aa4.83□□□□□ -1.64
PRKDC-211ENST00000546304 UBE2L5PA0A1B0GUS4 154 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 TMEM213A2RRL7 107 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 ZFP92A6NM28 416 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 SEC14L6B5MCN3 397 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 FNDC10F2Z333 226 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 NDUFA4O00483 81 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 OR2C1O95371 312 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 CTSGP08311 255 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 LYL1P12980 280 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 HBG1P69891 147 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 HBG2P69892 147 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 FGL1Q08830 312 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 ARL16Q0P5N6 197 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 KLF5Q13887 457 aaPredicted RBP4.82□□□□□ -1.64
PRKDC-211ENST00000546304 GAMTQ14353 236 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 TIGITQ495A1 244 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 UNQ9165/PRO28630Q6UXU0 137 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 ZNF600Q6ZNG1 722 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 GPHB5Q86YW7 130 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 OR9G4Q8NGQ1 327 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 OR1S2Q8NGQ3 325 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 THAP6Q8TBB0 222 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 NPIPB3Q92617 1050 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 ZNF414Q96IQ9 312 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 GGACTQ9BVM4 153 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 SLC25A31Q9H0C2 315 aa4.82□□□□□ -1.64
PRKDC-211ENST00000546304 DAZ1Q9NQZ3 744 aaKnown RBP4.82□□□□□ -1.64
PRKDC-211ENST00000546304 IGKV1D-37A0A075B6S9 117 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 IGKV1OR2-108A0A075B7D4 117 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 IGHV3OR16-8A0A075B7F1 116 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 TRAV30A0A087WSZ9 112 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 FXYD6-FXYD2A0A087WZ82 144 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 ZNF320A2RRD8 509 aa4.81□□□□□ -1.64
PRKDC-211ENST00000546304 G3V3Q6 166 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms