RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 RNF2Q99496 336 aa12.67□□□□□ -0.38
LTBR-215ENST00000546296 C11orf1Q9H5F2 150 aa12.67□□□□□ -0.38
LTBR-215ENST00000546296 TMEM231Q9H6L2 316 aa12.67□□□□□ -0.38
LTBR-215ENST00000546296 SMAD5-AS1Q9Y6J3 95 aa12.67□□□□□ -0.38
LTBR-215ENST00000546296 HNRNPCP07910 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
LTBR-215ENST00000546296 ARL16Q0P5N6 197 aa12.66□□□□□ -0.38
LTBR-215ENST00000546296 TMEM144Q7Z5S9 345 aa12.66□□□□□ -0.38
LTBR-215ENST00000546296 STX12Q86Y82 276 aa12.66□□□□□ -0.38
LTBR-215ENST00000546296 ST8SIA2Q92186 375 aa12.66□□□□□ -0.38
LTBR-215ENST00000546296 PBDC1Q9BVG4 233 aa12.66□□□□□ -0.38
LTBR-215ENST00000546296 GGACTQ9BVM4 153 aa12.66□□□□□ -0.38
LTBR-215ENST00000546296 NPVFQ9HCQ7 196 aa12.66□□□□□ -0.38
LTBR-215ENST00000546296 LYRM2Q9NU23 88 aaPredicted RBP12.66□□□□□ -0.38
LTBR-215ENST00000546296 RABAC1Q9UI14 185 aa12.66□□□□□ -0.38
LTBR-215ENST00000546296 LSM4Q9Y4Z0 139 aaKnown RBP12.66□□□□□ -0.38
LTBR-215ENST00000546296 IGKV1OR2-108A0A075B7D4 117 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 E5RGE8 158 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 FNDC10F2Z333 226 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 CRYBB3P26998 211 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 CD81P60033 236 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 RPL11P62913 178 aaKnown RBP12.65□□□□□ -0.38
LTBR-215ENST00000546296 SLC38A11Q08AI6 406 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 OXA1LQ15070 435 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 TMEM252Q8N6L7 170 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 TMEM217Q8N7C4 229 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 PPP1R1CQ8WVI7 109 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 RNF125Q96EQ8 232 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 GRAMD2BQ96HH9 432 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 NEURL2Q9BR09 285 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 VSIRQ9H7M9 311 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 PFDN2Q9UHV9 154 aa12.65□□□□□ -0.38
LTBR-215ENST00000546296 IGKV3-7A0A075B6H7 116 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 IGSF23A1L1A6 192 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 TSPAN4O14817 238 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 CFDP00746 253 aaPredicted RBP12.64□□□□□ -0.39
LTBR-215ENST00000546296 CD5P06127 495 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 PET100P0DJ07 73 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 SULT1A1P50225 295 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 LYZP61626 148 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 HBG1P69891 147 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 HBG2P69892 147 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 FCN2Q15485 313 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 USF2Q15853 346 aaPredicted RBP12.64□□□□□ -0.39
LTBR-215ENST00000546296 TCF24Q7RTU0 167 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 Q8N1Y9 231 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 LILRB2Q8N423 598 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 BPIFCQ8NFQ6 507 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 SPAG8Q99932 426 aaPredicted RBP12.64□□□□□ -0.39
LTBR-215ENST00000546296 SLC25A31Q9H0C2 315 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 OR5AC2Q9NZP5 309 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 SORL1Q92673 2214 aa12.64□□□□□ -0.39
LTBR-215ENST00000546296 DFFBO76075 338 aa12.63□□□□□ -0.39
LTBR-215ENST00000546296 CXCL3P19876 107 aa12.63□□□□□ -0.39
LTBR-215ENST00000546296 S100A11P31949 105 aa12.63□□□□□ -0.39
LTBR-215ENST00000546296 P2RY1P47900 373 aa12.63□□□□□ -0.39
LTBR-215ENST00000546296 PAFAH1B2P68402 229 aa12.63□□□□□ -0.39
LTBR-215ENST00000546296 TEPPQ6URK8 271 aa12.63□□□□□ -0.39
LTBR-215ENST00000546296 PPP1R14BQ96C90 147 aa12.63□□□□□ -0.39
LTBR-215ENST00000546296 OR4C46A6NHA9 309 aa12.62□□□□□ -0.39
LTBR-215ENST00000546296 H0YIZ8 118 aa12.62□□□□□ -0.39
LTBR-215ENST00000546296 MPC2O95563 127 aa12.62□□□□□ -0.39
LTBR-215ENST00000546296 CD7P09564 240 aa12.62□□□□□ -0.39
LTBR-215ENST00000546296 TFPI2P48307 235 aa12.62□□□□□ -0.39
LTBR-215ENST00000546296 EIF2B2P49770 351 aaKnown RBP12.62□□□□□ -0.39
LTBR-215ENST00000546296 CYP2G1PQ6ZSU1 146 aa12.62□□□□□ -0.39
LTBR-215ENST00000546296 GBGT1Q8N5D6 347 aa12.62□□□□□ -0.39
LTBR-215ENST00000546296 TUBA4BQ9H853 241 aa12.62□□□□□ -0.39
LTBR-215ENST00000546296 U3KQE9 123 aa12.62□□□□□ -0.39
LTBR-215ENST00000546296 DNASE2O00115 360 aaPredicted RBP12.61□□□□□ -0.39
LTBR-215ENST00000546296 IGHV4-30-4P0DP06 118 aa12.61□□□□□ -0.39
LTBR-215ENST00000546296 ORM2P19652 201 aa12.61□□□□□ -0.39
LTBR-215ENST00000546296 GATA2P23769 480 aaPredicted RBP12.61□□□□□ -0.39
LTBR-215ENST00000546296 NUP62P37198 522 aaPredicted RBP12.61□□□□□ -0.39
LTBR-215ENST00000546296 SELENOTP62341 195 aa12.61□□□□□ -0.39
LTBR-215ENST00000546296 RAB31Q13636 194 aa12.61□□□□□ -0.39
LTBR-215ENST00000546296 FAM90A2PQ658T7 463 aa12.61□□□□□ -0.39
LTBR-215ENST00000546296 WFDC3Q8IUB2 231 aa12.61□□□□□ -0.39
LTBR-215ENST00000546296 OR11H7Q8NGC8 314 aa12.61□□□□□ -0.39
LTBR-215ENST00000546296 UQCC1Q9NVA1 299 aa12.61□□□□□ -0.39
LTBR-215ENST00000546296 OR11H12B2RN74 326 aa12.6□□□□□ -0.39
LTBR-215ENST00000546296 EWSR1Q01844 656 aaKnown RBP eCLIP12.6□□□□□ -0.39
LTBR-215ENST00000546296 ATP6V1FQ16864 119 aa12.6□□□□□ -0.39
LTBR-215ENST00000546296 C16orf54Q6UWD8 224 aa12.6□□□□□ -0.39
LTBR-215ENST00000546296 TMEM182Q6ZP80 229 aaPredicted RBP12.6□□□□□ -0.39
LTBR-215ENST00000546296 RNF126Q9BV68 326 aa12.6□□□□□ -0.39
LTBR-215ENST00000546296 TMEM147Q9BVK8 224 aa12.6□□□□□ -0.39
LTBR-215ENST00000546296 HELTA6NFD8 242 aa12.59□□□□□ -0.39
LTBR-215ENST00000546296 S100A7P31151 101 aa12.59□□□□□ -0.39
LTBR-215ENST00000546296 NHLH2Q02577 135 aa12.59□□□□□ -0.39
LTBR-215ENST00000546296 DEFB125Q8N687 156 aa12.59□□□□□ -0.39
LTBR-215ENST00000546296 OR1B1Q8NGR6 318 aa12.59□□□□□ -0.39
LTBR-215ENST00000546296 THAP6Q8TBB0 222 aa12.59□□□□□ -0.39
LTBR-215ENST00000546296 B9D2Q9BPU9 175 aa12.59□□□□□ -0.39
LTBR-215ENST00000546296 MS4A6AQ9H2W1 248 aa12.59□□□□□ -0.39
LTBR-215ENST00000546296 AGPAT2O15120 278 aa12.58□□□□□ -0.4
LTBR-215ENST00000546296 BUB3O43684 328 aa12.58□□□□□ -0.4
LTBR-215ENST00000546296 HYPMO75409 117 aa12.58□□□□□ -0.4
LTBR-215ENST00000546296 FRMD6-AS1P0C7T7 363 aa12.58□□□□□ -0.4
LTBR-215ENST00000546296 LINC00869P0C866 280 aa12.58□□□□□ -0.4
LTBR-215ENST00000546296 AP2S1P53680 142 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms