RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 GAMTQ14353 236 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 CASC10Q5T4H9 136 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 MZT2BQ6NZ67 158 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 WFDC3Q8IUB2 231 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 GBGT1Q8N5D6 347 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 MITD1Q8WV92 249 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 RNF125Q96EQ8 232 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 C20orf85Q9H1P6 137 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 HYDINQ4G0P3 5121 aa8.76□□□□□ -1.01
HDAC4-216ENST00000544989 STARD9Q9P2P6 4700 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 IGHV3-66A0A0C4DH42 116 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 SNRPGP15A8MWD9 76 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 TCRBP04435 133 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 PSG1P11464 419 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 ANXA7P20073 488 aaKnown RBP8.75□□□□□ -1.01
HDAC4-216ENST00000544989 C16orf54Q6UWD8 224 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 STXBP6Q8NFX7 210 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 TRGV9Q99603 122 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 MAGT1Q9H0U3 335 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 CSTL1Q9H114 145 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 MAP6D1Q9H9H5 199 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 SEPSECSQ9HD40 501 aaKnown RBP8.75□□□□□ -1.01
HDAC4-216ENST00000544989 RETNQ9HD89 108 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 FBXL17Q9UF56 701 aa8.75□□□□□ -1.01
HDAC4-216ENST00000544989 MPTX1A8MV57 137 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 PLA2G10O15496 165 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 SPRY2O43597 315 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 ADAP1O75689 374 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 TAS2R30P59541 319 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 SNRPD3P62318 126 aaKnown RBP8.74□□□□□ -1.01
HDAC4-216ENST00000544989 ZNF846Q147U1 533 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 TMEM41BQ5BJD5 291 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 SPANXN5Q5MJ07 72 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 C1orf194Q5T5A4 169 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 APRG1Q8IVJ8 170 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 LILRB2Q8N423 598 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 THAP8Q8NA92 274 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 OR4D5Q8NGN0 318 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 GATAD1Q8WUU5 269 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 GLMPQ8WWB7 406 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 RAB40CQ96S21 281 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 OVOL2Q9BRP0 275 aa8.74□□□□□ -1.01
HDAC4-216ENST00000544989 WDR12Q9GZL7 423 aaKnown RBP8.74□□□□□ -1.01
HDAC4-216ENST00000544989 PLECQ15149 4684 aaKnown RBP8.73□□□□□ -1.01
HDAC4-216ENST00000544989 FAM240BA0A1B0GVZ2 78 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 K7EQG2 157 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 BUB3O43684 328 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 RPL35AP18077 110 aaKnown RBP8.73□□□□□ -1.01
HDAC4-216ENST00000544989 ATF4P18848 351 aaPredicted RBP8.73□□□□□ -1.01
HDAC4-216ENST00000544989 DEFB131AP59861 70 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 USF2Q15853 346 aaPredicted RBP8.73□□□□□ -1.01
HDAC4-216ENST00000544989 IAH1Q2TAA2 248 aaPredicted RBP8.73□□□□□ -1.01
HDAC4-216ENST00000544989 SAMD13Q5VXD3 122 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 SIGLEC15Q6ZMC9 328 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 S100A7AQ86SG5 101 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 STHQ8IWL8 128 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 TMEM217Q8N7C4 229 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 RNF183Q96D59 192 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 SMIM8Q96KF7 97 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 PBDC1Q9BVG4 233 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 KRTAP17-1Q9BYP8 105 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 NRN1Q9NPD7 142 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 NUDT15Q9NV35 164 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 PSENENQ9NZ42 101 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 PTTG2Q9NZH5 202 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 SLC45A2Q9UMX9 530 aa8.73□□□□□ -1.01
HDAC4-216ENST00000544989 IGKV1D-37A0A075B6S9 117 aa8.72□□□□□ -1.01
HDAC4-216ENST00000544989 A6NHS1 94 aa8.72□□□□□ -1.01
HDAC4-216ENST00000544989 FNDC10F2Z333 226 aa8.72□□□□□ -1.01
HDAC4-216ENST00000544989 SSSCA1O60232 199 aa8.72□□□□□ -1.01
HDAC4-216ENST00000544989 POLR2GP62487 172 aaKnown RBP eCLIP8.72□□□□□ -1.01
HDAC4-216ENST00000544989 AKR1C1Q04828 323 aa8.72□□□□□ -1.01
HDAC4-216ENST00000544989 ASAH1Q13510 395 aa8.72□□□□□ -1.01
HDAC4-216ENST00000544989 BPIFCQ8NFQ6 507 aa8.72□□□□□ -1.01
HDAC4-216ENST00000544989 ZNF431Q8TF32 576 aaPredicted RBP8.72□□□□□ -1.01
HDAC4-216ENST00000544989 DCANP1Q8TF63 244 aa8.72□□□□□ -1.01
HDAC4-216ENST00000544989 PPP1R14BQ96C90 147 aa8.72□□□□□ -1.01
HDAC4-216ENST00000544989 BATF3Q9NR55 127 aa8.72□□□□□ -1.01
HDAC4-216ENST00000544989 RYR1P21817 5038 aa8.71□□□□□ -1.01
HDAC4-216ENST00000544989 PRSS46E5RG02 174 aa8.71□□□□□ -1.02
HDAC4-216ENST00000544989 TSC22D2O75157 780 aa8.71□□□□□ -1.02
HDAC4-216ENST00000544989 H2AFB2P0C5Z0 115 aa8.71□□□□□ -1.02
HDAC4-216ENST00000544989 SPP1P10451 314 aa8.71□□□□□ -1.02
HDAC4-216ENST00000544989 LYZP61626 148 aa8.71□□□□□ -1.02
HDAC4-216ENST00000544989 ZNF90Q03938 601 aa8.71□□□□□ -1.02
HDAC4-216ENST00000544989 DEFB135Q30KP9 77 aa8.71□□□□□ -1.02
HDAC4-216ENST00000544989 MORN3Q6PF18 240 aaPredicted RBP8.71□□□□□ -1.02
HDAC4-216ENST00000544989 TMEM144Q7Z5S9 345 aa8.71□□□□□ -1.02
HDAC4-216ENST00000544989 ZBTB8BQ8NAP8 495 aaPredicted RBP8.71□□□□□ -1.02
HDAC4-216ENST00000544989 GGACTQ9BVM4 153 aa8.71□□□□□ -1.02
HDAC4-216ENST00000544989 GSKIPQ9P0R6 139 aa8.71□□□□□ -1.02
HDAC4-216ENST00000544989 RNF24Q9Y225 148 aa8.71□□□□□ -1.02
HDAC4-216ENST00000544989 HERC2O95714 4834 aa8.7□□□□□ -1.02
HDAC4-216ENST00000544989 TRAV6A0A075B6T7 132 aa8.7□□□□□ -1.02
HDAC4-216ENST00000544989 H3BP45 60 aa8.7□□□□□ -1.02
HDAC4-216ENST00000544989 SCGB1D2O95969 90 aa8.7□□□□□ -1.02
HDAC4-216ENST00000544989 ID1P41134 155 aa8.7□□□□□ -1.02
HDAC4-216ENST00000544989 SELENOTP62341 195 aa8.7□□□□□ -1.02
HDAC4-216ENST00000544989 DLK1P80370 383 aa8.7□□□□□ -1.02
HDAC4-216ENST00000544989 ACOT7LQ6ZUV0 252 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms