RNA–Protein interactions for RNA: ENST00000544921.5

FAM60A-209, Transcript of Protein FAM60A, human

TSL 4

Gene FAM60A, Length 845 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM60A-209	ENST00000544921	HIST1H1B	P16401	226 aa	Known RBP	4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	RAB4A	P20338	218 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	NPY1R	P25929	384 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	SNCA	P37840	140 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	TAS2R30	P59541	319 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	PKIA	P61925	76 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	VAMP2	P63027	116 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	ERH	P84090	104 aa	Known RBP	4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	RHOG	P84095	191 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	AKR1C1	Q04828	323 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	CLINT1	Q14677	625 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	GUK1	Q16774	197 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	AWAT1	Q58HT5	328 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	C18orf65	Q6ZTR6	163 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	REC114	Q7Z4M0	266 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	ZFP82	Q8N141	532 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	TMEM252	Q8N6L7	170 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	RNF152	Q8N8N0	203 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	OR4F5	Q8NH21	305 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	MYOZ3	Q8TDC0	251 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	RAB24	Q969Q5	203 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	MISP3	Q96FF7	219 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	TMEM68	Q96MH6	324 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	CIB3	Q96Q77	187 aa	Predicted RBP	4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	GGACT	Q9BVM4	153 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	C19orf24	Q9BVV8	132 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	SLC35B3	Q9H1N7	401 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	HIPK2	Q9H2X6	1198 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	LYRM2	Q9NU23	88 aa	Predicted RBP	4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	RNF114	Q9Y508	228 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921	ATR	Q13535	2644 aa		4.37	□□□□□ -1.71
FAM60A-209	ENST00000544921		H3BUA1	57 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921		M0R036	132 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	CST7	O76096	145 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	BRI3	O95415	125 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	MT-CO2	P00403	227 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	IGHV3-23	P01764	117 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	TRGV3	P03979	118 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	PF4V1	P10720	104 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	DEFA4	P12838	97 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	RPL12	P30050	165 aa	Known RBP	4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	P2RY1	P47900	373 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	SULT1A1	P50225	295 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	RAB9A	P51151	201 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	TPPP2	P59282	170 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	TAS2R60	P59551	318 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	RPL23A	P62750	156 aa	Known RBP	4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	NHLH2	Q02577	135 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	FOXE3	Q13461	319 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	OR8G2P	Q6IF36	304 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	SLC25A24	Q6NUK1	477 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	TEX38	Q6PEX7	206 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	DPPA3	Q6W0C5	159 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	ETV3L	Q6ZN32	361 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921		Q6ZRG5	221 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	MRPL52	Q86TS9	123 aa	Known RBP	4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	MRPL41	Q8IXM3	137 aa	Known RBP	4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	C11orf44	Q8N8P7	122 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	OR5AU1	Q8NGC0	362 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	OR10G4	Q8NGN3	311 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	WFDC12	Q8WWY7	111 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	PINX1	Q96BK5	328 aa	Known RBP	4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	ZNF414	Q96IQ9	312 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	CCDC140	Q96MF4	163 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	GINS3	Q9BRX5	216 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	GNB4	Q9HAV0	340 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	WFDC1	Q9HC57	220 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	ZNF355P	Q9NSJ1	428 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	TMEM242	Q9NWH2	141 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	FBXL7	Q9UJT9	491 aa		4.36	□□□□□ -1.71
FAM60A-209	ENST00000544921	IGKV1OR2-108	A0A075B7D4	117 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	PPP1R2P9	O14990	202 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	NDUFS6	O75380	124 aa	Known RBP	4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	OR2C1	O95371	312 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	LY86	O95711	162 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	TRBV12-3	P01733	135 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	IGHV3-11	P01762	117 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	HBE1	P02100	147 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	ELANE	P08246	267 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	GPX4	P36969	197 aa	Predicted RBP	4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	OPRK1	P41145	380 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	CAMLG	P49069	296 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	SUB1	P53999	127 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	SLC35B1	P78383	322 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	DLK1	P80370	383 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	SRSF3	P84103	164 aa	Known RBP	4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	CD69	Q07108	199 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	PNRC1	Q12796	327 aa	Predicted RBP	4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	FOXL1	Q12952	345 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	GAMT	Q14353	236 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	ZNF266	Q14584	549 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	C15orf32	Q32M92	178 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	SOHLH1	Q5JUK2	328 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	TMEM217	Q8N7C4	229 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	ZNF491	Q8N8L2	437 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	NECAP1	Q8NC96	275 aa		4.35	□□□□□ -1.71
FAM60A-209	ENST00000544921	ZNF502	Q8TBZ5	544 aa		4.35	□□□□□ -1.71

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