RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 ACTL10Q5JWF8 245 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 FAM166AQ6J272 317 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 ADAMTSL5Q6ZMM2 481 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 TRAV13-1A0A0B4J241 112 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 IGFBP3P17936 291 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-204ENST00000544246 PPP1R32Q7Z5V6 425 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 HIST1H2BLQ99880 126 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 CD24P25063 80 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 SCRT1Q9BWW7 348 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 SPANXDQ9BXN6 97 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 FXYD7P58549 80 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 KNL1Q8NG31 2342 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 A0A087X0K7 114 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 LINC00271P0C7V0 271 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 DUTP33316 252 aaKnown RBP8.6□□□□□ -1.03
PCDH9-204ENST00000544246 PSG7Q13046 419 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 TNFRSF14Q92956 283 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 hDV102S1A0JD36 115 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 LY6G5BQ8NDX9 201 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 RNASE6Q93091 150 aaKnown RBP8.6□□□□□ -1.03
PCDH9-204ENST00000544246 SIGLEC12Q96PQ1 595 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 UBL5Q9BZL1 73 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 MBNL3Q9NUK0 354 aaKnown RBP8.6□□□□□ -1.03
PCDH9-204ENST00000544246 LOC285556D6RIA3 1793 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 A0A0G2JMM0 328 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 A0A1W2PPB8 328 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 KIR3DP1A8MWS1 328 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 ZNF561-AS1K7EIQ3 104 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 TIMM23O14925 209 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 SH2D1AO60880 128 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 KNTC1P50748 2209 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 RAMP3O60896 148 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 CELA3AP09093 270 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 RFPL3SP0C7P2 107 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 ZNF497Q6ZNH5 498 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 C1QTNF4Q9BXJ3 329 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 ZNF638Q14966 1978 aaKnown RBP8.6□□□□□ -1.03
PCDH9-204ENST00000544246 DLEU1O43261 78 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 CD55P08174 381 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 SRSF3P84103 164 aaKnown RBP8.6□□□□□ -1.03
PCDH9-204ENST00000544246 SRSF7Q16629 238 aaKnown RBP eCLIP8.6□□□□□ -1.03
PCDH9-204ENST00000544246 SPXQ9BT56 116 aa8.6□□□□□ -1.03
PCDH9-204ENST00000544246 IGHG3P01860 377 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 RPL15P61313 204 aaKnown RBP8.59□□□□□ -1.03
PCDH9-204ENST00000544246 IGLV3-21P80748 117 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-204ENST00000544246 ATRAIDQ6UW56 229 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 NEGR1Q7Z3B1 354 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 TRAV40A0A0B4J280 105 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 MMP23AO75900 390 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 DSCR9P59020 149 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 HEPN1Q6WQI6 88 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 HIST3H2BBQ8N257 126 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 SELENOKQ9Y6D0 94 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 NDUFS5O43920 106 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 ZNF138P52744 262 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 TMEM258P61165 79 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 TRAV25A0A0B4J276 109 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 SRRM4A7MD48 611 aaKnown RBP8.59□□□□□ -1.03
PCDH9-204ENST00000544246 WISP3O95389 354 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-204ENST00000544246 TIMP3P35625 211 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 PMVKQ15126 192 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 TMEM158Q8WZ71 300 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 SLC25A28Q96A46 364 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 LINC00477Q96M19 166 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 TMEM242Q9NWH2 141 aa8.59□□□□□ -1.03
PCDH9-204ENST00000544246 SMIM10L1P0DMW3 83 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 CEACAM1P13688 526 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 C1orf194Q5T5A4 169 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 SMIM10Q96HG1 83 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 CHCHD2Q9Y6H1 151 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-204ENST00000544246 CELA3BP08861 270 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 PRB4P10163 310 aaPredicted RBP8.58□□□□□ -1.04
PCDH9-204ENST00000544246 PSG1P11464 419 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 UTF1Q5T230 341 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 C4orf51C9J302 202 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 LHBP01229 141 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 C9orf139Q6ZV77 190 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 AMBPP02760 352 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 PMS2P5A8MQ11 134 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 UBE2V1Q13404 147 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 PSG3Q16557 428 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 CTHRC1Q96CG8 243 aa8.58□□□□□ -1.04
PCDH9-204ENST00000544246 SCN10AQ9Y5Y9 1956 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 TRBV7-1A0A0A6YYK4 115 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 HAMPP81172 84 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 SPSB3Q6PJ21 355 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 RNF126Q9BV68 326 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 TCF15Q12870 199 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 VMO1Q7Z5L0 202 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 EXOC3-AS1Q8N2X6 119 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 DOCK5Q9H7D0 1870 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 OTOFQ9HC10 1997 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 IGKV1D-13A0A0B4J2D9 117 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 EREGO14944 169 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 IGKV1-13P0DP09 117 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 C15orf32Q32M92 178 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-204ENST00000544246 LINC00527Q9UJ94 153 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 THAP8Q8NA92 274 aa8.57□□□□□ -1.04
PCDH9-204ENST00000544246 DSCR8Q96T75 97 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms