RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 SRD5A3Q9H8P0 318 aa13.52□□□□□ -0.24
PTPRO-209ENST00000543886 PITPNC1Q9UKF7 332 aa13.52□□□□□ -0.24
PTPRO-209ENST00000543886 TSTD3H0UI37 97 aa13.52□□□□□ -0.25
PTPRO-209ENST00000543886 FABP4P15090 132 aa13.52□□□□□ -0.25
PTPRO-209ENST00000543886 PKIAP61925 76 aa13.52□□□□□ -0.25
PTPRO-209ENST00000543886 CX3CL1P78423 397 aa13.52□□□□□ -0.25
PTPRO-209ENST00000543886 PDZD11Q5EBL8 140 aa13.52□□□□□ -0.25
PTPRO-209ENST00000543886 CENPWQ5EE01 88 aa13.52□□□□□ -0.25
PTPRO-209ENST00000543886 GFI1BQ5VTD9 330 aa13.52□□□□□ -0.25
PTPRO-209ENST00000543886 CDPF1Q6NVV7 123 aa13.52□□□□□ -0.25
PTPRO-209ENST00000543886 FAM168AQ92567 244 aa13.52□□□□□ -0.25
PTPRO-209ENST00000543886 FXYD5Q96DB9 178 aa13.52□□□□□ -0.25
PTPRO-209ENST00000543886 IMMP2LQ96T52 175 aa13.52□□□□□ -0.25
PTPRO-209ENST00000543886 CACNA1BQ00975 2339 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 K7EIM0 57 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 GGCTO75223 188 aaKnown RBP13.51□□□□□ -0.25
PTPRO-209ENST00000543886 BRS3P32247 399 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 PLP1P60201 277 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 TEX38Q6PEX7 206 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 OR10G8Q8NGN5 311 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 RBM14Q96PK6 669 aaKnown RBP13.51□□□□□ -0.25
PTPRO-209ENST00000543886 NPIPB5A8MRT5 1133 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 SAA4P35542 130 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 LYZP61626 148 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 TIGITQ495A1 244 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 PACRGQ96M98 296 aaPredicted RBP13.51□□□□□ -0.25
PTPRO-209ENST00000543886 C1RLQ9NZP8 487 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 HIGD1AQ9Y241 93 aa13.51□□□□□ -0.25
PTPRO-209ENST00000543886 FLNCQ14315 2725 aa13.5□□□□□ -0.25
PTPRO-209ENST00000543886 K7EN84 100 aa13.5□□□□□ -0.25
PTPRO-209ENST00000543886 PSG1P11464 419 aa13.5□□□□□ -0.25
PTPRO-209ENST00000543886 SSTP61278 116 aa13.5□□□□□ -0.25
PTPRO-209ENST00000543886 OR5R1Q8NH85 324 aa13.5□□□□□ -0.25
PTPRO-209ENST00000543886 BTF3L4Q96K17 158 aa13.5□□□□□ -0.25
PTPRO-209ENST00000543886 COL12A1Q99715 3063 aa13.49□□□□□ -0.25
PTPRO-209ENST00000543886 SPTAN1Q13813 2472 aaKnown RBP13.49□□□□□ -0.25
PTPRO-209ENST00000543886 PHOX2AO14813 284 aa13.49□□□□□ -0.25
PTPRO-209ENST00000543886 NPFFO15130 113 aa13.49□□□□□ -0.25
PTPRO-209ENST00000543886 FAM3BP58499 235 aaPredicted RBP13.49□□□□□ -0.25
PTPRO-209ENST00000543886 ZNF329Q86UD4 541 aa13.49□□□□□ -0.25
PTPRO-209ENST00000543886 C14orf144Q96I85 54 aa13.49□□□□□ -0.25
PTPRO-209ENST00000543886 POLR3KQ9Y2Y1 108 aaPredicted RBP13.49□□□□□ -0.25
PTPRO-209ENST00000543886 TACC2O95359 2948 aa13.49□□□□□ -0.25
PTPRO-209ENST00000543886 RNF224P0DH78 156 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 NDPQ00604 133 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 KLF17Q5JT82 389 aaPredicted RBP13.48□□□□□ -0.25
PTPRO-209ENST00000543886 FAM120AOSQ5T036 256 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 ASPHD1Q5U4P2 390 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 CLEC2AQ6UVW9 174 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 REC114Q7Z4M0 266 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 TMEM183AQ8IXX5 376 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 SGMS2Q8NHU3 365 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 AJUBAQ96IF1 538 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 HIST1H2BLQ99880 126 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 SPOCK3Q9BQ16 436 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 A0A0U1RQK1 487 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 NDUFS8O00217 210 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 IGKV1-17P01599 117 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 DDTP30046 118 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 ATP5J2P56134 94 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 FOXL1Q12952 345 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 TTC9CQ8N5M4 171 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 C10orf105Q8TEF2 133 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 BLNKQ8WV28 456 aa13.48□□□□□ -0.25
PTPRO-209ENST00000543886 IGLV11-55A0A075B6I3 123 aa13.47□□□□□ -0.25
PTPRO-209ENST00000543886 TYMSP04818 313 aa13.47□□□□□ -0.25
PTPRO-209ENST00000543886 CNN1P51911 297 aaKnown RBP13.47□□□□□ -0.25
PTPRO-209ENST00000543886 ERVFC1-1P60608 527 aa13.47□□□□□ -0.25
PTPRO-209ENST00000543886 Q8N9W7 124 aa13.47□□□□□ -0.25
PTPRO-209ENST00000543886 WNK2Q9Y3S1 2297 aa13.47□□□□□ -0.25
PTPRO-209ENST00000543886 IGHV4-61A0A0C4DH41 118 aa13.46□□□□□ -0.25
PTPRO-209ENST00000543886 PEX7O00628 323 aa13.46□□□□□ -0.25
PTPRO-209ENST00000543886 SNRPCP09234 159 aaKnown RBP13.46□□□□□ -0.25
PTPRO-209ENST00000543886 RANP62826 216 aaKnown RBP13.46□□□□□ -0.25
PTPRO-209ENST00000543886 LEMD1Q68G75 181 aa13.46□□□□□ -0.25
PTPRO-209ENST00000543886 CDC42EP3Q9UKI2 254 aa13.46□□□□□ -0.25
PTPRO-209ENST00000543886 TRAV30A0A087WSZ9 112 aa13.46□□□□□ -0.26
PTPRO-209ENST00000543886 IGHV7-81A0A0B4J1V7 117 aa13.46□□□□□ -0.26
PTPRO-209ENST00000543886 GNG7O60262 68 aa13.46□□□□□ -0.26
PTPRO-209ENST00000543886 PRB1P04280 392 aa13.46□□□□□ -0.26
PTPRO-209ENST00000543886 NBEAP1P0C6P0 100 aa13.46□□□□□ -0.26
PTPRO-209ENST00000543886 GP9P14770 177 aa13.46□□□□□ -0.26
PTPRO-209ENST00000543886 TAS2R60P59551 318 aa13.46□□□□□ -0.26
PTPRO-209ENST00000543886 OR5I1Q13606 314 aa13.46□□□□□ -0.26
PTPRO-209ENST00000543886 IGF2BP2-AS1Q96M15 143 aa13.46□□□□□ -0.26
PTPRO-209ENST00000543886 FANCD2OSQ96PS1 177 aa13.46□□□□□ -0.26
PTPRO-209ENST00000543886 SLC25A39Q9BZJ4 359 aaPredicted RBP13.46□□□□□ -0.26
PTPRO-209ENST00000543886 THYN1Q9P016 225 aa13.46□□□□□ -0.26
PTPRO-209ENST00000543886 USP9XQ93008 2570 aaPredicted RBP13.45□□□□□ -0.26
PTPRO-209ENST00000543886 CENPVL3A0A0U1RRI6 287 aa13.45□□□□□ -0.26
PTPRO-209ENST00000543886 ZNF320A2RRD8 509 aa13.45□□□□□ -0.26
PTPRO-209ENST00000543886 TOMM40O96008 361 aa13.45□□□□□ -0.26
PTPRO-209ENST00000543886 HLA-DRB1P01911 266 aa13.45□□□□□ -0.26
PTPRO-209ENST00000543886 PAX8Q06710 450 aa13.45□□□□□ -0.26
PTPRO-209ENST00000543886 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
PTPRO-209ENST00000543886 IL36BQ9NZH7 164 aa13.45□□□□□ -0.26
PTPRO-209ENST00000543886 SLC17A3O00476 420 aa13.44□□□□□ -0.26
PTPRO-209ENST00000543886 MGST1P10620 155 aaKnown RBP13.44□□□□□ -0.26
PTPRO-209ENST00000543886 MFAP4P55083 255 aa13.44□□□□□ -0.26
PTPRO-209ENST00000543886 JOSD1Q15040 202 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms