RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PRR30Q53SZ7 412 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-212ENST00000543766 ZNF324BQ6AW86 544 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-212ENST00000543766 OR51H1Q8NH63 302 aa7.25□□□□□ -1.25
VPS13D-212ENST00000543766 UBE2E3Q969T4 207 aa7.25□□□□□ -1.25
VPS13D-212ENST00000543766 FAM3DQ96BQ1 224 aa7.25□□□□□ -1.25
VPS13D-212ENST00000543766 MCTS1Q9ULC4 181 aaKnown RBP7.25□□□□□ -1.25
VPS13D-212ENST00000543766 USP17L23D6RBM5 183 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 UBE2E1P51965 193 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 ZNF134P52741 427 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 TMEM155Q4W5P6 130 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 LCNL1Q6ZST4 164 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 DCAF4L2Q8NA75 395 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 UBE2E2Q96LR5 201 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 HCFC1P51610 2035 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 TRAV2A0A0B4J234 112 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 H3BSH0 61 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 LOXL1Q08397 574 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-212ENST00000543766 FOXF2Q12947 444 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 FAM201AQ5SY85 155 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 LINC01590Q5TEZ4 76 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 MMD2Q8IY49 270 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 KCNS1Q96KK3 526 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 TMEM70Q9BUB7 260 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 CES1P1Q9UKY3 287 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 PRRG2O14669 202 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 UQCRQO14949 82 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 LINC00869P0C866 280 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 DLX1P56177 255 aa7.24□□□□□ -1.25
VPS13D-212ENST00000543766 WDFY4Q6ZS81 3184 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 TMEM202A6NGA9 273 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 ASAH2BP0C7U1 165 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 CTLA4P16410 223 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 OPRK1P41145 380 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 IGFBPL1Q8WX77 278 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 KXD1Q9BQD3 176 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 NXT2Q9NPJ8 142 aaKnown RBP7.23□□□□□ -1.25
VPS13D-212ENST00000543766 Q5XG85 94 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 TMEM14EPQ6UXP3 125 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 TMEFF1Q8IYR6 380 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 Q8N976 141 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 THAP8Q8NA92 274 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 LINC01555Q8NAE3 123 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 BADQ92934 168 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 BRWD1Q9NSI6 2320 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 CXorf51AA0A1B0GTR3 108 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 RRHO14718 337 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 IGFBP3P17936 291 aaPredicted RBP7.23□□□□□ -1.25
VPS13D-212ENST00000543766 EMC6Q9BV81 110 aa7.23□□□□□ -1.25
VPS13D-212ENST00000543766 C11orf68Q9H3H3 251 aaKnown RBP7.23□□□□□ -1.25
VPS13D-212ENST00000543766 KLF13Q9Y2Y9 288 aaPredicted RBP7.23□□□□□ -1.25
VPS13D-212ENST00000543766 TCF20Q9UGU0 1960 aaKnown RBP7.23□□□□□ -1.25
VPS13D-212ENST00000543766 MDFIC2A0A1B0GVS7 189 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 A0A1W2PS18 150 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 SCTP09683 121 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 NMUP48645 174 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 DAZ2Q13117 558 aaKnown RBP7.22□□□□□ -1.25
VPS13D-212ENST00000543766 FHL3Q13643 280 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 ZNF56Q15929 161 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 RTL8BQ17RB0 113 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 DAZ4Q86SG3 579 aaKnown RBP7.22□□□□□ -1.25
VPS13D-212ENST00000543766 ZNF441Q8N8Z8 693 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 OR10AC1Q8NH08 325 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 RTL8AQ9BWD3 113 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 DAZ1Q9NQZ3 744 aaKnown RBP7.22□□□□□ -1.25
VPS13D-212ENST00000543766 DAZ3Q9NR90 486 aaKnown RBP7.22□□□□□ -1.25
VPS13D-212ENST00000543766 SAA2-SAA4A0A096LPE2 208 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 KNCNA6PVL3 124 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 K7EMI3 77 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 HMGN2P05204 90 aaKnown RBP7.22□□□□□ -1.25
VPS13D-212ENST00000543766 ZNF823P16415 610 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 SAA4P35542 130 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 C1QL2Q7Z5L3 287 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 NT5CQ8TCD5 201 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 LSM10Q969L4 123 aaKnown RBP7.22□□□□□ -1.25
VPS13D-212ENST00000543766 MDFICQ9P1T7 246 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 RABAC1Q9UI14 185 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 TEX50A0A1B0GTY4 177 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 SYS1-DBNDD2H3BUS1 97 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 K7EMT4 169 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 HLA-DOBP13765 273 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 GAPTQ8N292 157 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 NFAM1Q8NET5 270 aaPredicted RBP7.22□□□□□ -1.25
VPS13D-212ENST00000543766 MRPL32Q9BYC8 188 aaKnown RBP7.22□□□□□ -1.25
VPS13D-212ENST00000543766 MPC1Q9Y5U8 109 aa7.22□□□□□ -1.25
VPS13D-212ENST00000543766 HLA-DRB1P01911 266 aa7.21□□□□□ -1.25
VPS13D-212ENST00000543766 RBP4P02753 201 aa7.21□□□□□ -1.25
VPS13D-212ENST00000543766 PI3P19957 117 aa7.21□□□□□ -1.25
VPS13D-212ENST00000543766 FAM78AQ5JUQ0 283 aa7.21□□□□□ -1.25
VPS13D-212ENST00000543766 ZGRF1Q86YA3 2104 aa7.21□□□□□ -1.25
VPS13D-212ENST00000543766 HMGA1P17096 107 aaKnown RBP7.21□□□□□ -1.26
VPS13D-212ENST00000543766 HOXB4P17483 251 aaPredicted RBP7.21□□□□□ -1.26
VPS13D-212ENST00000543766 CDAP32320 146 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 RBM3P98179 157 aaKnown RBP7.21□□□□□ -1.26
VPS13D-212ENST00000543766 ECSCRQ19T08 205 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 IGFL2Q6UWQ7 119 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 ZNF493Q6ZR52 646 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 AAED1Q7RTV5 226 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 LHFPL1Q86WI0 220 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 BMFQ96LC9 184 aa7.21□□□□□ -1.26
VPS13D-212ENST00000543766 KLF16Q9BXK1 252 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms