RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 IGLV3-21P80748 117 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-215ENST00000543185 JPT2Q9H910 190 aa16.23■□□□□ 0.19
HDAC4-215ENST00000543185 SPEM2Q0P670 501 aa16.23■□□□□ 0.19
HDAC4-215ENST00000543185 BTCP35070 178 aa16.23■□□□□ 0.19
HDAC4-215ENST00000543185 LHX2P50458 406 aa16.23■□□□□ 0.19
HDAC4-215ENST00000543185 C8orf46Q8TAG6 207 aa16.23■□□□□ 0.19
HDAC4-215ENST00000543185 GFRA4Q9GZZ7 299 aa16.23■□□□□ 0.19
HDAC4-215ENST00000543185 NUP210Q8TEM1 1887 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-215ENST00000543185 KIR3DS1Q14943 382 aa16.23■□□□□ 0.19
HDAC4-215ENST00000543185 GUSBP1Q15486 140 aa16.23■□□□□ 0.19
HDAC4-215ENST00000543185 MAJINQ3KP22 176 aa16.23■□□□□ 0.19
HDAC4-215ENST00000543185 ZNF784Q8NCA9 323 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-215ENST00000543185 GAGE1Q13065 139 aa16.22■□□□□ 0.19
HDAC4-215ENST00000543185 MLNRO43193 412 aa16.22■□□□□ 0.19
HDAC4-215ENST00000543185 BOD1L2Q8IYS8 172 aa16.22■□□□□ 0.19
HDAC4-215ENST00000543185 F8W1H4 67 aa16.22■□□□□ 0.19
HDAC4-215ENST00000543185 NBR2O15453 112 aa16.22■□□□□ 0.19
HDAC4-215ENST00000543185 H3BMM0 161 aa16.22■□□□□ 0.19
HDAC4-215ENST00000543185 PF4P02776 101 aa16.22■□□□□ 0.19
HDAC4-215ENST00000543185 CCL4P13236 92 aa16.22■□□□□ 0.19
HDAC4-215ENST00000543185 UPK2O00526 184 aa16.22■□□□□ 0.19
HDAC4-215ENST00000543185 EGR1P18146 543 aa16.22■□□□□ 0.19
HDAC4-215ENST00000543185 HOXD3P31249 432 aaPredicted RBP16.21■□□□□ 0.19
HDAC4-215ENST00000543185 CD5LO43866 347 aa16.21■□□□□ 0.19
HDAC4-215ENST00000543185 JMJD8Q96S16 334 aa16.21■□□□□ 0.19
HDAC4-215ENST00000543185 ZNHIT1O43257 154 aa16.21■□□□□ 0.19
HDAC4-215ENST00000543185 SP9P0CG40 484 aa16.21■□□□□ 0.19
HDAC4-215ENST00000543185 LINC01587Q99440 93 aa16.21■□□□□ 0.19
HDAC4-215ENST00000543185 PLSCR4Q9NRQ2 329 aa16.21■□□□□ 0.19
HDAC4-215ENST00000543185 REPIN1Q9BWE0 567 aaKnown RBP16.21■□□□□ 0.19
HDAC4-215ENST00000543185 FAM89BQ8N5H3 189 aa16.21■□□□□ 0.19
HDAC4-215ENST00000543185 SYS1-DBNDD2H3BUS1 97 aa16.21■□□□□ 0.19
HDAC4-215ENST00000543185 PMVKQ15126 192 aa16.21■□□□□ 0.18
HDAC4-215ENST00000543185 OCIAD2Q56VL3 154 aa16.21■□□□□ 0.18
HDAC4-215ENST00000543185 C17orf98A8MV24 154 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 EIF4EBP2Q13542 120 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-215ENST00000543185 CCL1P22362 96 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 PPP1R27Q86WC6 154 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 APOBEC3AP31941 199 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-215ENST00000543185 CENPVQ7Z7K6 275 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-215ENST00000543185 OVOL1O14753 267 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 PRCDQ00LT1 54 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 WDR90Q96KV7 1748 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 LY6G6FQ5SQ64 297 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 SAA2-SAA4A0A096LPE2 208 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 IGKV1D-33P01593 117 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 IGKV1-33P01594 117 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 SAA2P0DJI9 122 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-215ENST00000543185 SMRP1Q8NCR6 262 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 R3HDMLQ9H3Y0 253 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 C2orf16Q68DN1 1984 aa16.2■□□□□ 0.18
HDAC4-215ENST00000543185 LEAP2Q969E1 77 aa16.19■□□□□ 0.18
HDAC4-215ENST00000543185 SRXN1Q9BYN0 137 aa16.19■□□□□ 0.18
HDAC4-215ENST00000543185 C9orf153Q5TBE3 101 aa16.19■□□□□ 0.18
HDAC4-215ENST00000543185 F8WEM9 126 aa16.19■□□□□ 0.18
HDAC4-215ENST00000543185 COX6A1P12074 109 aa16.19■□□□□ 0.18
HDAC4-215ENST00000543185 COX6B1P14854 86 aa16.19■□□□□ 0.18
HDAC4-215ENST00000543185 TNFRSF14Q92956 283 aa16.19■□□□□ 0.18
HDAC4-215ENST00000543185 LAIR2Q6ISS4 152 aa16.19■□□□□ 0.18
HDAC4-215ENST00000543185 LAMTOR3Q9UHA4 124 aa16.19■□□□□ 0.18
HDAC4-215ENST00000543185 DSCAML1Q8TD84 2053 aa16.18■□□□□ 0.18
HDAC4-215ENST00000543185 RAMP3O60896 148 aa16.18■□□□□ 0.18
HDAC4-215ENST00000543185 ZNRF1Q8ND25 227 aa16.18■□□□□ 0.18
HDAC4-215ENST00000543185 A6NNC1 897 aa16.18■□□□□ 0.18
HDAC4-215ENST00000543185 TEX43Q6ZNM6 134 aa16.18■□□□□ 0.18
HDAC4-215ENST00000543185 MRPS18CQ9Y3D5 142 aaKnown RBP16.18■□□□□ 0.18
HDAC4-215ENST00000543185 CEP192Q8TEP8 1941 aa16.18■□□□□ 0.18
HDAC4-215ENST00000543185 SMIM10L1P0DMW3 83 aa16.18■□□□□ 0.18
HDAC4-215ENST00000543185 SFTA2Q6UW10 78 aa16.18■□□□□ 0.18
HDAC4-215ENST00000543185 SMIM10Q96HG1 83 aa16.18■□□□□ 0.18
HDAC4-215ENST00000543185 OCC1Q8TAD7 63 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 NEU4Q8WWR8 484 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-215ENST00000543185 ATP5J2P56134 94 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 NEUROG3Q9Y4Z2 214 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 IQCF6A8MYZ5 107 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 SELLP14151 372 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 UBE2WQ96B02 151 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 IGHV3-48P01763 117 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 LYPD1Q8N2G4 141 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 IFITM1P13164 125 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 CITED1Q99966 193 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 ZNF106Q9H2Y7 1883 aaKnown RBP16.17■□□□□ 0.18
HDAC4-215ENST00000543185 CSRP3P50461 194 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 CMC4P56277 68 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-215ENST00000543185 LINC01551Q86U37 167 aa16.17■□□□□ 0.18
HDAC4-215ENST00000543185 TDGF1P3P51864 188 aa16.16■□□□□ 0.18
HDAC4-215ENST00000543185 ITLN2Q8WWU7 325 aaPredicted RBP16.16■□□□□ 0.18
HDAC4-215ENST00000543185 NAV3Q8IVL0 2385 aa16.16■□□□□ 0.18
HDAC4-215ENST00000543185 SRSF3P84103 164 aaKnown RBP16.16■□□□□ 0.18
HDAC4-215ENST00000543185 SIGLEC15Q6ZMC9 328 aa16.15■□□□□ 0.18
HDAC4-215ENST00000543185 SLC22A18ASQ8N1D0 253 aa16.15■□□□□ 0.18
HDAC4-215ENST00000543185 A8MWP6 167 aa16.15■□□□□ 0.18
HDAC4-215ENST00000543185 ZIC3O60481 467 aa16.15■□□□□ 0.18
HDAC4-215ENST00000543185 PPDPFLQ8WWR9 84 aa16.15■□□□□ 0.18
HDAC4-215ENST00000543185 D6R8Y8 96 aa16.15■□□□□ 0.18
HDAC4-215ENST00000543185 MYMXA0A1B0GTQ4 84 aa16.15■□□□□ 0.18
HDAC4-215ENST00000543185 GLRX5Q86SX6 157 aa16.15■□□□□ 0.18
HDAC4-215ENST00000543185 FNDC10F2Z333 226 aa16.15■□□□□ 0.18
HDAC4-215ENST00000543185 THSD7AQ9UPZ6 1657 aa16.15■□□□□ 0.18
HDAC4-215ENST00000543185 GFI1BQ5VTD9 330 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms