RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 MAGOHP61326 146 aaKnown RBP0.24□□□□□ -2.37
KNTC1-213ENST00000542727 KRTAP21-1Q3LI58 79 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 CLDN22Q8N7P3 220 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 OR8D4Q8NGM9 314 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 OR2T10Q8NGZ9 312 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 TMEM254Q8TBM7 123 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 SLAMF6Q96DU3 332 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 DCSTAMPQ9H295 470 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 C14orf132Q9NPU4 83 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 MRPL27Q9P0M9 148 aaKnown RBP0.24□□□□□ -2.37
KNTC1-213ENST00000542727 CYSLTR1Q9Y271 337 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 GPR98Q8WXG9 6306 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 BCORL1Q5H9F3 1711 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 MGAMO43451 1857 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 TRBV6-4A0A1B0GX49 114 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 C7orf71A4D174 169 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 PHGR1C9JFL3 82 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 M0R036 132 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 CD2P06729 351 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 LINC00322Q6ZN03 302 aaPredicted RBP0.23□□□□□ -2.37
KNTC1-213ENST00000542727 ST6GALNAC3Q8NDV1 305 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 SLC30A7Q8NEW0 376 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 OR52L1Q8NGH7 329 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 SLC25A40Q8TBP6 338 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 CCDC42Q96M95 316 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 BCL2L10Q9HD36 194 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 C14orf105Q9NVL8 296 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 VPS29Q9UBQ0 182 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 FREM3P0C091 2139 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 TET1Q8NFU7 2136 aa0.23□□□□□ -2.37
KNTC1-213ENST00000542727 FRAS1Q86XX4 4008 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 hADV38S2A0JD32 116 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 TLCD2A6NGC4 264 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 CYB5BO43169 146 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 TTRP02766 147 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 SERPINA6P08185 405 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 RPS17P08708 135 aaKnown RBP0.22□□□□□ -2.37
KNTC1-213ENST00000542727 LCA10Q71F78 164 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 TRAPPC5Q8IUR0 188 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 GDPD1Q8N9F7 314 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 PLPP5Q8NEB5 264 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 OR2T35Q8NGX2 323 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 CT55Q8WUE5 264 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 FAM172AQ8WUF8 416 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 ADAT3Q96EY9 351 aaPredicted RBP0.22□□□□□ -2.37
KNTC1-213ENST00000542727 PARD6GQ9BYG4 376 aaPredicted RBP0.22□□□□□ -2.37
KNTC1-213ENST00000542727 C10orf95Q9H7T3 257 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 UCK1Q9HA47 277 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 FBXO5Q9UKT4 447 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 NAV2Q8IVL1 2488 aa0.22□□□□□ -2.37
KNTC1-213ENST00000542727 MYH2Q9UKX2 1941 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 SMIM23A6NLE4 172 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 CCL16O15467 120 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 TIMM17BO60830 172 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 PPIBP23284 216 aaKnown RBP0.21□□□□□ -2.38
KNTC1-213ENST00000542727 OMPP47874 163 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 DYNLT1P63172 113 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 SRSF6Q13247 344 aaKnown RBP0.21□□□□□ -2.38
KNTC1-213ENST00000542727 C12orf74Q32Q52 190 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 PRADC1Q9BSG0 188 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 C20orf27Q9GZN8 174 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 NIT2Q9NQR4 276 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 ORMDL1Q9P0S3 153 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 ARHGEF11O15085 1522 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 CACNA1EQ15878 2313 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 PIK3C2GO75747 1445 aa0.21□□□□□ -2.38
KNTC1-213ENST00000542727 ZDBF2Q9HCK1 2354 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 LOC285556D6RIA3 1793 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 TNCP24821 2201 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 IGHV1-58A0A0C4DH39 117 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 TCRBV4S1A1TA0A5B7 111 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 SMIM9A6NGZ8 99 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 ZNF682O95780 498 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 SRIP30626 198 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 EIF5AP63241 154 aaKnown RBP0.2□□□□□ -2.38
KNTC1-213ENST00000542727 IMPG1Q17R60 797 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 Q8IYB0 196 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 OR6V1Q8N148 313 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 OR11H6Q8NGC7 330 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 ITFG2Q969R8 447 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 BORCS7Q96B45 105 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 C2orf50Q96LR7 162 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 TRIM4Q9C037 500 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 RNASE7Q9H1E1 156 aaKnown RBP0.2□□□□□ -2.38
KNTC1-213ENST00000542727 PSTPIP2Q9H939 334 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 UQCC1Q9NVA1 299 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 NOSIPQ9Y314 301 aaKnown RBP0.2□□□□□ -2.38
KNTC1-213ENST00000542727 PRELID3BQ9Y3B1 194 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 CHCHD2Q9Y6H1 151 aaPredicted RBP0.2□□□□□ -2.38
KNTC1-213ENST00000542727 TNS3Q68CZ2 1445 aa0.2□□□□□ -2.38
KNTC1-213ENST00000542727 RTL1A6NKG5 1358 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 MUC4Q99102 2169 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 NAV3Q8IVL0 2385 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 KCPQ6ZWJ8 1503 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 A0A087WUJ7 227 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 PDE6DO43924 150 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 DHFRP00374 187 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 PRH1P02810 166 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 C8GP07360 202 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 SRP14P37108 136 aaKnown RBP0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms