RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 Q8WTZ3 238 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 SMIM8Q96KF7 97 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 CIB3Q96Q77 187 aaPredicted RBP7.23□□□□□ -1.25
YBX3-212ENST00000542002 MS4A6AQ9H2W1 248 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 PSENENQ9NZ42 101 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 RCL1Q9Y2P8 373 aaKnown RBP7.23□□□□□ -1.25
YBX3-212ENST00000542002 C7orf66A4D0T2 115 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 FAM25EA8MYX2 175 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 SCGB1D2O95969 90 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 IL4P05112 153 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 IL5P05113 134 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 ARL16Q0P5N6 197 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 TMEM14EPQ6UXP3 125 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 WFDC3Q8IUB2 231 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 APRG1Q8IVJ8 170 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 THAP8Q8NA92 274 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 OR51G1Q8NGK1 321 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 RCHY1Q96PM5 261 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 METTL26Q96S19 204 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 GINS3Q9BRX5 216 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 C11orf1Q9H5F2 150 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 RETNQ9HD89 108 aa7.22□□□□□ -1.25
YBX3-212ENST00000542002 STRAPQ9Y3F4 350 aaKnown RBP7.22□□□□□ -1.25
YBX3-212ENST00000542002 ZFP92A6NM28 416 aa7.21□□□□□ -1.26
YBX3-212ENST00000542002 GATA2P23769 480 aaPredicted RBP7.21□□□□□ -1.26
YBX3-212ENST00000542002 P2RY1P47900 373 aa7.21□□□□□ -1.26
YBX3-212ENST00000542002 RPP30P78346 268 aaKnown RBP7.21□□□□□ -1.26
YBX3-212ENST00000542002 OR2F1Q13607 317 aa7.21□□□□□ -1.26
YBX3-212ENST00000542002 C16orf54Q6UWD8 224 aa7.21□□□□□ -1.26
YBX3-212ENST00000542002 GSG1LQ6UXU4 331 aa7.21□□□□□ -1.26
YBX3-212ENST00000542002 SLC35E1Q96K37 410 aa7.21□□□□□ -1.26
YBX3-212ENST00000542002 MARVELD1Q9BSK0 173 aa7.21□□□□□ -1.26
YBX3-212ENST00000542002 NBEAL2Q6ZNJ1 2754 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 C5orf51A6NDU8 294 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 OR4C46A6NHA9 309 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 INMT-MINDY4F8WBC2 141 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 K7EPK0 472 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 BUB3O43684 328 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 SIX6O95475 246 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 HNRNPCP07910 306 aaKnown RBP eCLIP7.2□□□□□ -1.264e-7■□□□□ 9.3
YBX3-212ENST00000542002 METTL15P1P0C7V9 234 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 RPL11P62913 178 aaKnown RBP7.2□□□□□ -1.26
YBX3-212ENST00000542002 OR8G2PQ6IF36 304 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 ACOT7LQ6ZUV0 252 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 ENKURQ8TC29 256 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 GLMPQ8WWB7 406 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 RNF125Q96EQ8 232 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 C2orf50Q96LR7 162 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 RAB40CQ96S21 281 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 TRGV9Q99603 122 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
YBX3-212ENST00000542002 A0A1W2PS18 150 aa7.19□□□□□ -1.26
YBX3-212ENST00000542002 SNRPGP15A8MWD9 76 aa7.19□□□□□ -1.26
YBX3-212ENST00000542002 SCGB2A1O75556 95 aa7.19□□□□□ -1.26
YBX3-212ENST00000542002 TAS2R30P59541 319 aa7.19□□□□□ -1.26
YBX3-212ENST00000542002 RRAS2P62070 204 aaPredicted RBP7.19□□□□□ -1.26
YBX3-212ENST00000542002 DCANP1Q8TF63 244 aa7.19□□□□□ -1.26
YBX3-212ENST00000542002 C17orf77Q96MU5 243 aa7.19□□□□□ -1.26
YBX3-212ENST00000542002 WWC2-AS2Q96NR7 200 aa7.19□□□□□ -1.26
YBX3-212ENST00000542002 FAM110AQ9BQ89 295 aa7.19□□□□□ -1.26
YBX3-212ENST00000542002 PBDC1Q9BVG4 233 aa7.19□□□□□ -1.26
YBX3-212ENST00000542002 ZMAT4Q9H898 229 aa7.19□□□□□ -1.26
YBX3-212ENST00000542002 MAP6D1Q9H9H5 199 aa7.19□□□□□ -1.26
YBX3-212ENST00000542002 LSM5Q9Y4Y9 91 aaKnown RBP7.19□□□□□ -1.26
YBX3-212ENST00000542002 KMT2CQ8NEZ4 4911 aaKnown RBP7.19□□□□□ -1.26
YBX3-212ENST00000542002 LOC102724200A0A096LPH7 203 aaPredicted RBP7.18□□□□□ -1.26
YBX3-212ENST00000542002 FAM24AA6NFZ4 105 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 K7EQG2 157 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 DNASE2O00115 360 aaPredicted RBP7.18□□□□□ -1.26
YBX3-212ENST00000542002 TSC22D2O75157 780 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 CD5P06127 495 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 RPL35AP18077 110 aaKnown RBP7.18□□□□□ -1.26
YBX3-212ENST00000542002 EIF2B2P49770 351 aaKnown RBP7.18□□□□□ -1.26
YBX3-212ENST00000542002 PAFAH1B2P68402 229 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 RAB32Q13637 225 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 LEMD1Q68G75 181 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 TMEM144Q7Z5S9 345 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 STXBP6Q8NFX7 210 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 SPATA25Q9BR10 227 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 GGTLC1Q9BX51 225 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 EDA2RQ9HAV5 297 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 RABAC1Q9UI14 185 aa7.18□□□□□ -1.26
YBX3-212ENST00000542002 CSMD3Q7Z407 3707 aa7.17□□□□□ -1.26
YBX3-212ENST00000542002 TRAV2A0A0B4J234 112 aa7.17□□□□□ -1.26
YBX3-212ENST00000542002 H0YIZ8 118 aa7.17□□□□□ -1.26
YBX3-212ENST00000542002 BMI1P35226 326 aa7.17□□□□□ -1.26
YBX3-212ENST00000542002 H2BFSP57053 126 aa7.17□□□□□ -1.26
YBX3-212ENST00000542002 DEFB131AP59861 70 aa7.17□□□□□ -1.26
YBX3-212ENST00000542002 LYZP61626 148 aa7.17□□□□□ -1.26
YBX3-212ENST00000542002 DLK1P80370 383 aa7.17□□□□□ -1.26
YBX3-212ENST00000542002 OVOL2Q9BRP0 275 aa7.17□□□□□ -1.26
YBX3-212ENST00000542002 TMEM231Q9H6L2 316 aa7.17□□□□□ -1.26
YBX3-212ENST00000542002 STARD9Q9P2P6 4700 aa7.17□□□□□ -1.26
YBX3-212ENST00000542002 IGSF23A1L1A6 192 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 SMCO3A2RU48 225 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 GOSR2O14653 212 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 DEDDO75618 318 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 CST7O76096 145 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 ZNF688P0C7X2 276 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 ORM2P19652 201 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms