RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CD200R1LQ6Q8B3 271 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 HIST1H2BKO60814 126 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 HIST1H2BJP06899 126 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 HIST1H2BOP23527 126 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 HIST1H2BBP33778 126 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 HIST1H2BDP58876 126 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 HIST1H2BCP62807 126 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 HIST2H2BEQ16778 126 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.78□□□□□ -0.36
HMGA2-210ENST00000541363 SMRP1Q8NCR6 262 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 HIST1H2BHQ93079 126 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 HIST1H2BNQ99877 126 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 HIST1H2BMQ99879 126 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 RTBDNQ9BSG5 229 aaPredicted RBP12.78□□□□□ -0.36
HMGA2-210ENST00000541363 TRAV13-1A0A0B4J241 112 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 GAGE12BA1L429 117 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 PSG3Q16557 428 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 A0A0G2JK05 382 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 LOC105371267A0A1B0GV96 52 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 EFNB3Q15768 340 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 SLC25A39Q9BZJ4 359 aaPredicted RBP12.78□□□□□ -0.36
HMGA2-210ENST00000541363 TMEM133Q9H2Q1 129 aa12.78□□□□□ -0.36
HMGA2-210ENST00000541363 SP9P0CG40 484 aa12.77□□□□□ -0.36
HMGA2-210ENST00000541363 SPXQ9BT56 116 aa12.77□□□□□ -0.36
HMGA2-210ENST00000541363 OR9G9P0C7N8 305 aa12.77□□□□□ -0.36
HMGA2-210ENST00000541363 CGB3P0DN86 165 aa12.77□□□□□ -0.36
HMGA2-210ENST00000541363 HAMPP81172 84 aa12.77□□□□□ -0.36
HMGA2-210ENST00000541363 DMRTC2Q8IXT2 367 aaPredicted RBP12.77□□□□□ -0.36
HMGA2-210ENST00000541363 C11orf44Q8N8P7 122 aa12.77□□□□□ -0.36
HMGA2-210ENST00000541363 ZNF831Q5JPB2 1677 aa12.77□□□□□ -0.36
HMGA2-210ENST00000541363 IGHV2OR16-5A0A0B4J2B6 119 aa12.77□□□□□ -0.37
HMGA2-210ENST00000541363 UTF1Q5T230 341 aa12.77□□□□□ -0.37
HMGA2-210ENST00000541363 C17orf100A8MU93 164 aa12.77□□□□□ -0.37
HMGA2-210ENST00000541363 RBM3P98179 157 aaKnown RBP12.77□□□□□ -0.37
HMGA2-210ENST00000541363 CRIM1Q9NZV1 1036 aa12.77□□□□□ -0.37
HMGA2-210ENST00000541363 UBE2V1Q13404 147 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 SRSF7Q16629 238 aaKnown RBP eCLIP12.76□□□□□ -0.37
HMGA2-210ENST00000541363 FAM201AQ5SY85 155 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 IFI6P09912 130 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 FAM27E3Q08E93 113 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 NEGR1Q7Z3B1 354 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 HIST1H2BLQ99880 126 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 PSG1P11464 419 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 hDV102S1A0JD36 115 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 PIN1P1O15428 100 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 SLC22A18ASQ8N1D0 253 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 FXYD7P58549 80 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 KIAA2026Q5HYC2 2103 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 LY6G5BQ8NDX9 201 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 LINC00477Q96M19 166 aa12.76□□□□□ -0.37
HMGA2-210ENST00000541363 LOC101059948A0A1B0GTJ6 334 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 FREM3P0C091 2139 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 TRBV7-1A0A0A6YYK4 115 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 DEPPQ9NTK1 212 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 ZNF236Q9UL36 1845 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 CGB7P0DN87 165 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 ARFGEF1Q9Y6D6 1849 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 SRRM4A7MD48 611 aaKnown RBP12.75□□□□□ -0.37
HMGA2-210ENST00000541363 NDUFC2O95298 119 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 DEFB104AQ8WTQ1 72 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 BCORQ6W2J9 1755 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 ZNF138P52744 262 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 RAMP3O60896 148 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 PMVKQ15126 192 aa12.75□□□□□ -0.37
HMGA2-210ENST00000541363 MBNL3Q9NUK0 354 aaKnown RBP12.75□□□□□ -0.37
HMGA2-210ENST00000541363 DLEU1O43261 78 aa12.74□□□□□ -0.37
HMGA2-210ENST00000541363 CD55P08174 381 aa12.74□□□□□ -0.37
HMGA2-210ENST00000541363 MORN2Q502X0 79 aa12.74□□□□□ -0.37
HMGA2-210ENST00000541363 TEX38Q6PEX7 206 aa12.74□□□□□ -0.37
HMGA2-210ENST00000541363 HEPN1Q6WQI6 88 aa12.74□□□□□ -0.37
HMGA2-210ENST00000541363 COL22A1Q8NFW1 1626 aaPredicted RBP12.74□□□□□ -0.37
HMGA2-210ENST00000541363 DOCK10Q96BY6 2186 aa12.74□□□□□ -0.37
HMGA2-210ENST00000541363 TRBV20-1A0A075B6N2 111 aa12.74□□□□□ -0.37
HMGA2-210ENST00000541363 IGHG4P01861 327 aa12.74□□□□□ -0.37
HMGA2-210ENST00000541363 TCF15Q12870 199 aa12.74□□□□□ -0.37
HMGA2-210ENST00000541363 LYZL1Q6UWQ5 148 aa12.74□□□□□ -0.37
HMGA2-210ENST00000541363 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 PRB3Q04118 309 aaPredicted RBP12.73□□□□□ -0.37
HMGA2-210ENST00000541363 ABCA1O95477 2261 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 TIMP3P35625 211 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 FAM166AQ6J272 317 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 C1QTNF5Q9BXJ0 243 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 GAGE12JA6NER3 117 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 GAGE1Q13065 139 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 GAGE4Q13068 117 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 GAGE5Q13069 117 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 GAGE6Q13070 117 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 TMEM242Q9NWH2 141 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 TMEM158Q8WZ71 300 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 RPL15P61313 204 aaKnown RBP12.73□□□□□ -0.37
HMGA2-210ENST00000541363 ZNF497Q6ZNH5 498 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 C1QL2Q7Z5L3 287 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 IL18BPO95998 194 aa12.73□□□□□ -0.37
HMGA2-210ENST00000541363 RNASE6Q93091 150 aaKnown RBP12.73□□□□□ -0.37
HMGA2-210ENST00000541363 CD24P25063 80 aa12.72□□□□□ -0.37
HMGA2-210ENST00000541363 KIAA1551Q9HCM1 1747 aa12.72□□□□□ -0.37
HMGA2-210ENST00000541363 TAL2Q16559 108 aa12.72□□□□□ -0.37
HMGA2-210ENST00000541363 C1orf194Q5T5A4 169 aa12.72□□□□□ -0.37
HMGA2-210ENST00000541363 DOCK7Q96N67 2140 aa12.72□□□□□ -0.37
HMGA2-210ENST00000541363 IGKV1-8A0A0C4DH67 115 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms