RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 HSPB1P04792 205 aaKnown RBP7.17□□□□□ -1.26
DDX55-208ENST00000541259 C12orf54Q6X4T0 127 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 OR11H1Q8NG94 326 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 OR1N2Q8NGR9 330 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 RAX2Q96IS3 184 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 TRGV9Q99603 122 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 ZNF747Q9BV97 191 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 TRRAPQ9Y4A5 3859 aa7.17□□□□□ -1.26
DDX55-208ENST00000541259 IGHV3OR16-8A0A075B7F1 116 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 TRAV30A0A087WSZ9 112 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 LINC01619G3V211 115 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 NUPL2O15504 423 aaKnown RBP7.16□□□□□ -1.26
DDX55-208ENST00000541259 LINC00869P0C866 280 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 CAMLGP49069 296 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 SLURP1P55000 103 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 MIC13Q5XKP0 118 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 SPSB3Q6PJ21 355 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 CYP2G1PQ6ZSU1 146 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 NDUFA11Q86Y39 141 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 C3orf56Q8N813 242 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 HSD17B11Q8NBQ5 300 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 BPIFCQ8NFQ6 507 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 SCGB1C1Q8TD33 95 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 ATP6V0BQ99437 205 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 RSG1Q9BU20 258 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 GGTLC1Q9BX51 225 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 ZNF471Q9BX82 626 aaPredicted RBP7.16□□□□□ -1.26
DDX55-208ENST00000541259 NPCDR1Q9BY65 106 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 PARD6GQ9BYG4 376 aaPredicted RBP7.16□□□□□ -1.26
DDX55-208ENST00000541259 ARV1Q9H2C2 271 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 GAR1Q9NY12 217 aaKnown RBP7.16□□□□□ -1.26
DDX55-208ENST00000541259 SLC45A2Q9UMX9 530 aa7.16□□□□□ -1.26
DDX55-208ENST00000541259 BORCS7-ASMTA0A0B4J1R7 106 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 CCL24O00175 119 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 GGCTO75223 188 aaKnown RBP7.15□□□□□ -1.26
DDX55-208ENST00000541259 JTBO76095 146 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 TOMM40O96008 361 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 RD3LP0DJH9 198 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 PSG1P11464 419 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 ATP6V0CP27449 155 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 HOXD3P31249 432 aaPredicted RBP7.15□□□□□ -1.26
DDX55-208ENST00000541259 RIPPLY3P57055 190 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 YPEL3P61236 119 aaPredicted RBP7.15□□□□□ -1.26
DDX55-208ENST00000541259 ZNF266Q14584 549 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 RPEL1Q2QD12 228 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 FAM209BQ5JX69 171 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 TOMM20LQ6UXN7 152 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 UNQ9165/PRO28630Q6UXU0 137 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 DPF1Q92782 380 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 PPP1R14BQ96C90 147 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 RCC1LQ96I51 464 aaKnown RBP7.15□□□□□ -1.26
DDX55-208ENST00000541259 SH3BGRL3Q9H299 93 aa7.15□□□□□ -1.26
DDX55-208ENST00000541259 PUS1Q9Y606 427 aaKnown RBP eCLIP7.15□□□□□ -1.26
DDX55-208ENST00000541259 VWFP04275 2813 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 WI2-2373I1.2A0A1W2PRP0 233 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 ZNF207O43670 478 aaKnown RBP7.14□□□□□ -1.27
DDX55-208ENST00000541259 MPDU1O75352 247 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 YIF1AO95070 293 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 EDN2P20800 178 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 ZNF616Q08AN1 781 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 RAB31Q13636 194 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 FHL3Q13643 280 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 GCSAMLQ5JQS6 135 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 ZNF600Q6ZNG1 722 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 SLC51BQ86UW2 128 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 STPG3Q8N7X2 389 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 OR51G1Q8NGK1 321 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 Q8WTZ3 238 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 DLX4Q92988 240 aaPredicted RBP7.14□□□□□ -1.27
DDX55-208ENST00000541259 GINS3Q9BRX5 216 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 SLC39A9Q9NUM3 307 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 PXMP4Q9Y6I8 212 aa7.14□□□□□ -1.27
DDX55-208ENST00000541259 ZNF320A2RRD8 509 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 NDUFA4O00483 81 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 IL4P05112 153 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 RPL29P47914 159 aaKnown RBP7.13□□□□□ -1.27
DDX55-208ENST00000541259 SYNJ2BPP57105 145 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 LYZP61626 148 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 B2MP61769 119 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 SELENOTP62341 195 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 RELQ04864 619 aaPredicted RBP7.13□□□□□ -1.27
DDX55-208ENST00000541259 KLF5Q13887 457 aaPredicted RBP7.13□□□□□ -1.27
DDX55-208ENST00000541259 USF2Q15853 346 aaPredicted RBP7.13□□□□□ -1.27
DDX55-208ENST00000541259 TM4SF20Q53R12 229 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 PATE2Q6UY27 113 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 GPHB5Q86YW7 130 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 BAP18Q8IXM2 172 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 ZNF709Q8N972 641 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 SPATA3Q8NHX4 192 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 STOML3Q8TAV4 291 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 ST8SIA2Q92186 375 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 C20orf24Q9BUV8 137 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 SLC25A32Q9H2D1 315 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 VSIRQ9H7M9 311 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 DOK5Q9P104 306 aa7.13□□□□□ -1.27
DDX55-208ENST00000541259 C17orf112F2Z3M2 114 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 SCGB2A1O75556 95 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 TSPAN15O95858 294 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 CFDP00746 253 aaPredicted RBP7.12□□□□□ -1.27
DDX55-208ENST00000541259 FABP1P07148 127 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms