RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 C7orf77A4D0Y5 90 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 C11orf94C9JXX5 98 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 K7EIM0 57 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 M0R036 132 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 CRLF1O75462 422 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 TTC9CQ8N5M4 171 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 OR1L4Q8NGR5 311 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 OR4X1Q8NH49 305 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 TMEM37Q8WXS4 190 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 TXNDC17Q9BRA2 123 aa9.8□□□□□ -0.84
SMAD3-204ENST00000540846 DNAJC9-AS1A6NH13 148 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 TAS2R45P59539 299 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 PQLC2Q6ZP29 291 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 TMEM86BQ8N661 226 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 OR4F5Q8NH21 305 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 TVP23CQ96ET8 276 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 OR4F4Q96R69 305 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 RASL11BQ9BPW5 248 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 C20orf24Q9BUV8 137 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 DNAJC4Q9NNZ3 241 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 PITPNC1Q9UKF7 332 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 MOB4Q9Y3A3 225 aa9.79□□□□□ -0.84
SMAD3-204ENST00000540846 IGHV3-21A0A0B4J1V1 117 aa9.78□□□□□ -0.84
SMAD3-204ENST00000540846 PDE6DO43924 150 aa9.78□□□□□ -0.84
SMAD3-204ENST00000540846 COX7A2P2O60397 106 aa9.78□□□□□ -0.84
SMAD3-204ENST00000540846 CLN5O75503 358 aa9.78□□□□□ -0.84
SMAD3-204ENST00000540846 IGLC1P0CG04 106 aa9.78□□□□□ -0.84
SMAD3-204ENST00000540846 C8orf88P0DMB2 117 aa9.78□□□□□ -0.84
SMAD3-204ENST00000540846 EGR2P11161 476 aaPredicted RBP9.78□□□□□ -0.84
SMAD3-204ENST00000540846 PNRC1Q12796 327 aaPredicted RBP9.78□□□□□ -0.84
SMAD3-204ENST00000540846 C10orf113Q5VZT2 155 aa9.78□□□□□ -0.84
SMAD3-204ENST00000540846 C16orf82Q7Z2V1 217 aa9.78□□□□□ -0.84
SMAD3-204ENST00000540846 HSPB9Q9BQS6 159 aa9.78□□□□□ -0.84
SMAD3-204ENST00000540846 RPS10P5Q9NQ39 176 aa9.78□□□□□ -0.84
SMAD3-204ENST00000540846 SMCO4Q9NRQ5 59 aa9.78□□□□□ -0.84
SMAD3-204ENST00000540846 ELOA3CA0A087WX78 387 aaPredicted RBP9.77□□□□□ -0.85
SMAD3-204ENST00000540846 F6UZH7 168 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 ATP5G3P48201 142 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 PLP1P60201 277 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 UBE2G2P60604 165 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 SCGB2A2Q13296 93 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 KLK9Q2XQG4 91 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 PATE2Q6UY27 113 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 ZNF503Q96F45 646 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 FAM167A-AS1Q96KT0 104 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 FANCD2OSQ96PS1 177 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 TMEM167BQ9NRX6 74 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 KLK9Q9UKQ9 250 aa9.77□□□□□ -0.85
SMAD3-204ENST00000540846 YTHDF2Q9Y5A9 579 aaKnown RBP9.77□□□□□ -0.85
SMAD3-204ENST00000540846 A0A087WWC5 75 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 SH2D7A6NKC9 451 aaPredicted RBP9.76□□□□□ -0.85
SMAD3-204ENST00000540846 ZNF727A8MUV8 499 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 CLDN34H7C241 214 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 TSPAN4O14817 238 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 AKR1C3P42330 323 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 HILS1P60008 231 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 AKIRIN2Q53H80 203 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 CST9LP1Q5W188 147 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 Q6ZS46 218 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 SGMS2Q8NHU3 365 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 DUX5Q96PT3 197 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 SMIM7Q9BQ49 75 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 SLC25A2Q9BXI2 301 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 PARLQ9H300 379 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 DOK5Q9P104 306 aa9.76□□□□□ -0.85
SMAD3-204ENST00000540846 B4DEV8 164 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 OR7C2O60412 319 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 IGKV1-17P01599 117 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 FABP1P07148 127 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 MORN5Q5VZ52 161 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 FAM110DQ8TAY7 271 aaPredicted RBP9.75□□□□□ -0.85
SMAD3-204ENST00000540846 RPUSD4Q96CM3 377 aaKnown RBP9.75□□□□□ -0.85
SMAD3-204ENST00000540846 TUBA4BQ9H853 241 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 SDF2L1Q9HCN8 221 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 ZNF355PQ9NSJ1 428 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 NAT8Q9UHE5 227 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 M0QZK8 103 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 ATP6V0E1O15342 81 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 NPPCP23582 126 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 BLCAPP62952 87 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 OR5AU1Q8NGC0 362 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 OR51G1Q8NGK1 321 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 C11orf52Q96A22 123 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 TMEM68Q96MH6 324 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 THYN1Q9P016 225 aa9.75□□□□□ -0.85
SMAD3-204ENST00000540846 LINC01548A6NM66 108 aa9.74□□□□□ -0.85
SMAD3-204ENST00000540846 HYPMO75409 117 aa9.74□□□□□ -0.85
SMAD3-204ENST00000540846 PSG1P11464 419 aa9.74□□□□□ -0.85
SMAD3-204ENST00000540846 HIST1H1BP16401 226 aaKnown RBP9.74□□□□□ -0.85
SMAD3-204ENST00000540846 UBE2L3P68036 154 aaKnown RBP9.74□□□□□ -0.85
SMAD3-204ENST00000540846 TMEM241Q24JQ0 296 aa9.74□□□□□ -0.85
SMAD3-204ENST00000540846 ZNF674Q2M3X9 581 aa9.74□□□□□ -0.85
SMAD3-204ENST00000540846 TIGITQ495A1 244 aa9.74□□□□□ -0.85
SMAD3-204ENST00000540846 C15orf54Q8N8G6 183 aa9.74□□□□□ -0.85
SMAD3-204ENST00000540846 OR1B1Q8NGR6 318 aa9.74□□□□□ -0.85
SMAD3-204ENST00000540846 UHRF2Q96PU4 802 aa9.74□□□□□ -0.85
SMAD3-204ENST00000540846 TRAV5A0A0B4J249 113 aa9.73□□□□□ -0.85
SMAD3-204ENST00000540846 IGHG2P01859 326 aa9.73□□□□□ -0.85
SMAD3-204ENST00000540846 RNASE1P07998 156 aaKnown RBP9.73□□□□□ -0.85
SMAD3-204ENST00000540846 ORM2P19652 201 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms