RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 RD3LP0DJH9 198 aa10.15□□□□□ -0.78
SEMA4D-222ENST00000540183 MED14OSP0DP75 135 aa10.15□□□□□ -0.78
SEMA4D-222ENST00000540183 NPY1RP25929 384 aa10.15□□□□□ -0.78
SEMA4D-222ENST00000540183 TAS2R19P59542 299 aa10.15□□□□□ -0.78
SEMA4D-222ENST00000540183 NUTF2P61970 127 aaKnown RBP10.15□□□□□ -0.78
SEMA4D-222ENST00000540183 MZT2AQ6P582 158 aa10.15□□□□□ -0.78
SEMA4D-222ENST00000540183 FAM219AQ8IW50 185 aa10.15□□□□□ -0.78
SEMA4D-222ENST00000540183 RBPMSQ93062 196 aaKnown RBP10.15□□□□□ -0.78
SEMA4D-222ENST00000540183 LINC00052Q96N35 136 aa10.15□□□□□ -0.78
SEMA4D-222ENST00000540183 KRTAP4-5Q9BYR2 181 aa10.15□□□□□ -0.78
SEMA4D-222ENST00000540183 MIXL1Q9H2W2 232 aa10.15□□□□□ -0.78
SEMA4D-222ENST00000540183 TNFAIP8O95379 198 aa10.14□□□□□ -0.79
SEMA4D-222ENST00000540183 TBPP20226 339 aa10.14□□□□□ -0.79
SEMA4D-222ENST00000540183 NKX2-1P43699 371 aaPredicted RBP10.14□□□□□ -0.79
SEMA4D-222ENST00000540183 CTF1Q16619 201 aa10.14□□□□□ -0.79
SEMA4D-222ENST00000540183 LGALS9BQ3B8N2 356 aa10.14□□□□□ -0.79
SEMA4D-222ENST00000540183 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
SEMA4D-222ENST00000540183 NEU1Q99519 415 aa10.14□□□□□ -0.79
SEMA4D-222ENST00000540183 PBDC1Q9BVG4 233 aa10.14□□□□□ -0.79
SEMA4D-222ENST00000540183 SLC35B3Q9H1N7 401 aa10.14□□□□□ -0.79
SEMA4D-222ENST00000540183 C14orf166Q9Y224 244 aaKnown RBP10.14□□□□□ -0.79
SEMA4D-222ENST00000540183 LRP1BQ9NZR2 4599 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 CRYM-AS1A6NIL9 109 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 F6UB75 175 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 B3GALNT1O75752 331 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 IFNA10P01566 189 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 SPART-AS1P0CW21 52 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 HTN3P15516 51 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 ZNF182P17025 639 aaPredicted RBP10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 ZNF90Q03938 601 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 NMSQ5H8A3 153 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 FAM222AQ5U5X8 452 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 GPR107Q5VW38 600 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 Q6ZR54 194 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 UBE2DNLQ8IWF7 75 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 ZNF709Q8N972 641 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 RNF125Q96EQ8 232 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 SAV1Q9H4B6 383 aaPredicted RBP10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 SEPSECSQ9HD40 501 aaKnown RBP10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 DKK2Q9UBU2 259 aa10.13□□□□□ -0.79
SEMA4D-222ENST00000540183 IGKV1D-37A0A075B6S9 117 aa10.12□□□□□ -0.79
SEMA4D-222ENST00000540183 SOCS3O14543 225 aa10.12□□□□□ -0.79
SEMA4D-222ENST00000540183 GSTZ1O43708 216 aaPredicted RBP10.12□□□□□ -0.79
SEMA4D-222ENST00000540183 ETFRF1Q6IPR1 90 aa10.12□□□□□ -0.79
SEMA4D-222ENST00000540183 OR4B1Q8NGF8 309 aa10.12□□□□□ -0.79
SEMA4D-222ENST00000540183 OR4C16Q8NGL9 310 aa10.12□□□□□ -0.79
SEMA4D-222ENST00000540183 RBKSQ9H477 322 aa10.12□□□□□ -0.79
SEMA4D-222ENST00000540183 GPR132Q9UNW8 380 aa10.12□□□□□ -0.79
SEMA4D-222ENST00000540183 GABARAPH6UMI1 98 aa10.11□□□□□ -0.79
SEMA4D-222ENST00000540183 GABARAPO95166 117 aa10.11□□□□□ -0.79
SEMA4D-222ENST00000540183 SULT1A3P0DMM9 295 aa10.11□□□□□ -0.79
SEMA4D-222ENST00000540183 SULT1A4P0DMN0 295 aa10.11□□□□□ -0.79
SEMA4D-222ENST00000540183 C1orf158Q8N1D5 194 aa10.11□□□□□ -0.79
SEMA4D-222ENST00000540183 AP3S1Q92572 193 aa10.11□□□□□ -0.79
SEMA4D-222ENST00000540183 NIPSNAP3BQ9BS92 247 aa10.11□□□□□ -0.79
SEMA4D-222ENST00000540183 RFNGQ9Y644 331 aa10.11□□□□□ -0.79
SEMA4D-222ENST00000540183 TMEM56-RWDD3S4R434 201 aa10.11□□□□□ -0.79
SEMA4D-222ENST00000540183 SMIM9A6NGZ8 99 aa10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 CTDSP2O14595 271 aa10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 IFNA21P01568 189 aa10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 PRM2P04554 102 aa10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 LYZP61626 148 aa10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 OR2F1Q13607 317 aa10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 KLF9Q13886 244 aaPredicted RBP10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 GAMTQ14353 236 aa10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 LGI3Q8N145 548 aa10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 DTD1Q8TEA8 209 aa10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 C20orf173Q96LM9 149 aa10.1□□□□□ -0.79
SEMA4D-222ENST00000540183 APOBP04114 4563 aaKnown RBP10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 TMEM189A5PLL7 270 aa10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 ZFP92A6NM28 416 aa10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 DISC1C4P0D8 188 aa10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 SMIM18P0DKX4 95 aa10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 ZNF79Q15937 498 aa10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 FAM78BQ5VT40 261 aa10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 TMEM88Q6PEY1 159 aa10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 LYZL2Q7Z4W2 148 aa10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 OR51S1Q8NGJ8 323 aa10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 COQ8AQ8NI60 647 aa10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 HSPB7Q9UBY9 170 aa10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 YTHDF2Q9Y5A9 579 aaKnown RBP10.09□□□□□ -0.79
SEMA4D-222ENST00000540183 LOC102723971A0A1B0GUV8 181 aa10.08□□□□□ -0.8
SEMA4D-222ENST00000540183 RGS5O15539 181 aa10.08□□□□□ -0.8
SEMA4D-222ENST00000540183 ID1P41134 155 aa10.08□□□□□ -0.8
SEMA4D-222ENST00000540183 PSMB3P49720 205 aa10.08□□□□□ -0.8
SEMA4D-222ENST00000540183 SURF2Q15527 256 aaPredicted RBP10.08□□□□□ -0.8
SEMA4D-222ENST00000540183 OR8G2PQ6IF36 304 aa10.08□□□□□ -0.8
SEMA4D-222ENST00000540183 SMIM4Q8WVI0 70 aa10.08□□□□□ -0.8
SEMA4D-222ENST00000540183 C17orf77Q96MU5 243 aa10.08□□□□□ -0.8
SEMA4D-222ENST00000540183 C7orf50Q9BRJ6 194 aaKnown RBP10.08□□□□□ -0.8
SEMA4D-222ENST00000540183 A0A0J9YX75 114 aa10.07□□□□□ -0.8
SEMA4D-222ENST00000540183 AKAIN1P0CW23 69 aa10.07□□□□□ -0.8
SEMA4D-222ENST00000540183 SUPT4H1P63272 117 aaKnown RBP10.07□□□□□ -0.8
SEMA4D-222ENST00000540183 PSG9Q00887 426 aa10.07□□□□□ -0.8
SEMA4D-222ENST00000540183 SMCO1Q147U7 214 aa10.07□□□□□ -0.8
SEMA4D-222ENST00000540183 SPCS2Q15005 226 aa10.07□□□□□ -0.8
SEMA4D-222ENST00000540183 NOXA1Q86UR1 476 aa10.07□□□□□ -0.8
SEMA4D-222ENST00000540183 CLVS1Q8IUQ0 354 aaPredicted RBP10.07□□□□□ -0.8
SEMA4D-222ENST00000540183 C15orf40Q8WUR7 153 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms