RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TSSC4Q9Y5U2 329 aaPredicted RBP7.14□□□□□ -1.27
DDB1-217ENST00000540166 C17orf98A8MV24 154 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 H3BRM9 83 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 CDIPTO14735 213 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 P01737 135 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 SCGB1A1P11684 91 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 MC5RP33032 325 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 MIR17HGQ75NE6 70 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 ZNF295-AS1Q8N0V1 137 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 GRAMD2BQ96HH9 432 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 GGTLC1Q9BX51 225 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 TP73-AS1Q9UF72 201 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 PPIAL4EA0A075B759 164 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 WISP2O76076 250 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 SMIM17P0DL12 118 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 PPIAL4FP0DN26 164 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 EDDM3AQ14507 147 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 SAMD5Q5TGI4 173 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 SPATA31B1PQ5VZV4 182 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 TMEM42Q69YG0 159 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 TREML4Q6UXN2 200 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 NRGNQ92686 78 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 AMMECR1Q9Y4X0 333 aaPredicted RBP7.14□□□□□ -1.27
DDB1-217ENST00000540166 LAMA1P25391 3075 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 EML6Q6ZMW3 1958 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 ABCA2Q9BZC7 2435 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 HAX1O00165 279 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 COX7A2P2O60397 106 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 CELA3BP08861 270 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 APOBEC3AP31941 199 aaPredicted RBP7.13□□□□□ -1.27
DDB1-217ENST00000540166 PGLYRP4Q96LB8 373 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 AP5S1Q9NUS5 200 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.13□□□□□ -1.27
DDB1-217ENST00000540166 SLC25A5P05141 298 aaKnown RBP7.13□□□□□ -1.27
DDB1-217ENST00000540166 TIMM23BQ5SRD1 257 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 RASL11AQ6T310 242 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 TPRX1Q8N7U7 411 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 TMEM116Q8NCL8 245 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 OR4A5Q8NH83 315 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 CHCHD1Q96BP2 118 aaKnown RBP7.13□□□□□ -1.27
DDB1-217ENST00000540166 NABP2Q9BQ15 211 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 REPIN1Q9BWE0 567 aaKnown RBP7.13□□□□□ -1.27
DDB1-217ENST00000540166 MPC1Q9Y5U8 109 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.13□□□□□ -1.272e-7■■■□□ 18.1
DDB1-217ENST00000540166 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.13□□□□□ -1.27
DDB1-217ENST00000540166 SERTM2A0A1B0GWG4 89 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 GAGE12HA6NDE8 117 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 FOXH1O75593 365 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 FOXL2NBQ6ZUU3 175 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 Q8IYB0 196 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 C1QTNF5Q9BXJ0 243 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 RAB1BQ9H0U4 201 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 GEMIN7Q9H840 131 aaKnown RBP7.13□□□□□ -1.27
DDB1-217ENST00000540166 MED13LQ71F56 2210 aa7.13□□□□□ -1.27
DDB1-217ENST00000540166 SETXQ7Z333 2677 aaKnown RBP7.13□□□□□ -1.27
DDB1-217ENST00000540166 ZNF716A6NP11 495 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 CD300EQ496F6 205 aaPredicted RBP7.12□□□□□ -1.27
DDB1-217ENST00000540166 CFAP47Q6ZTR5 3102 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 NTF4P34130 210 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 MEF2CQ06413 473 aaPredicted RBP7.12□□□□□ -1.27
DDB1-217ENST00000540166 GUSBP1Q15486 140 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 TBC1D28Q2M2D7 210 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 DEFB113Q30KQ7 82 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 NUP35Q8NFH5 326 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 MGST2Q99735 147 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 TLN2Q9Y4G6 2542 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 TRAV26-1A0A087WT03 109 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 TRAV24A0A0B4J272 114 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 TEX48A0A1B0GUV7 120 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 J3QT63 122 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 OR2H2O95918 312 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 AREGP15514 252 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 NEUROG1Q92886 237 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 SGK494Q96LW2 274 aa7.12□□□□□ -1.27
DDB1-217ENST00000540166 C15orf62A8K5M9 175 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 TMEM249Q2WGJ8 235 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 ADAMTSL5Q6ZMM2 481 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 IGHV3-13P01766 116 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 IGHV3-7P01780 117 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 C8orf88P0DMB2 117 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 IGFBP2P18065 325 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 CEACAM3P40198 252 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 FOXG1P55316 489 aaPredicted RBP7.11□□□□□ -1.27
DDB1-217ENST00000540166 PSG3Q16557 428 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 WDR82Q6UXN9 313 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 TCF24Q7RTU0 167 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 OR4X2Q8NGF9 303 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 BLNKQ8WV28 456 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 Q96MF0 132 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 BEX4Q9NWD9 120 aaPredicted RBP7.11□□□□□ -1.27
DDB1-217ENST00000540166 MYO15AQ9UKN7 3530 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 OOEPA6NGQ2 149 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 COX8AP10176 69 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 CFAP161Q6P656 301 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 Q6ZPA2 131 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 C11orf52Q96A22 123 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 TIMD4Q96H15 378 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 NPFFR1Q9GZQ6 430 aa7.11□□□□□ -1.27
DDB1-217ENST00000540166 PSMB11A5LHX3 300 aa7.1□□□□□ -1.27
DDB1-217ENST00000540166 CEBPDP49716 269 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms