RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 TMEM14CQ9P0S9 112 aa10.65□□□□□ -0.7
UBE3B-209ENST00000539584 ZNRD1Q9P1U0 126 aa10.65□□□□□ -0.7
UBE3B-209ENST00000539584 KAAG1Q9UBP8 84 aa10.65□□□□□ -0.7
UBE3B-209ENST00000539584 FRYLO94915 3013 aa10.65□□□□□ -0.7
UBE3B-209ENST00000539584 A0A1W2PPI3 338 aa10.65□□□□□ -0.71
UBE3B-209ENST00000539584 TMEM178BH3BS89 294 aa10.65□□□□□ -0.71
UBE3B-209ENST00000539584 TNFRSF13BO14836 293 aaPredicted RBP10.65□□□□□ -0.71
UBE3B-209ENST00000539584 MOSP00540 346 aa10.65□□□□□ -0.71
UBE3B-209ENST00000539584 TCRAP04437 139 aa10.65□□□□□ -0.71
UBE3B-209ENST00000539584 IGLL1P15814 213 aa10.65□□□□□ -0.71
UBE3B-209ENST00000539584 CCL3L1P16619 93 aa10.65□□□□□ -0.71
UBE3B-209ENST00000539584 ORM2P19652 201 aa10.65□□□□□ -0.71
UBE3B-209ENST00000539584 FOXA3P55318 350 aaPredicted RBP10.65□□□□□ -0.71
UBE3B-209ENST00000539584 Q6ZS92 163 aa10.65□□□□□ -0.71
UBE3B-209ENST00000539584 DEFB123Q8N688 67 aa10.65□□□□□ -0.71
UBE3B-209ENST00000539584 OR1B1Q8NGR6 318 aa10.65□□□□□ -0.71
UBE3B-209ENST00000539584 COX11Q9Y6N1 276 aa10.65□□□□□ -0.71
UBE3B-209ENST00000539584 IGLC7A0M8Q6 106 aa10.64□□□□□ -0.71
UBE3B-209ENST00000539584 LIPFP07098 398 aa10.64□□□□□ -0.71
UBE3B-209ENST00000539584 WT1P19544 449 aaPredicted RBP10.64□□□□□ -0.71
UBE3B-209ENST00000539584 UBE2V1Q13404 147 aa10.64□□□□□ -0.71
UBE3B-209ENST00000539584 LCN12Q6JVE5 192 aa10.64□□□□□ -0.71
UBE3B-209ENST00000539584 ZNF841Q6ZN19 808 aa10.64□□□□□ -0.71
UBE3B-209ENST00000539584 OR4F17Q8NGA8 305 aa10.64□□□□□ -0.71
UBE3B-209ENST00000539584 OTORQ9NRC9 128 aa10.64□□□□□ -0.71
UBE3B-209ENST00000539584 VPS13AQ96RL7 3174 aa10.64□□□□□ -0.71
UBE3B-209ENST00000539584 A0A1B0GW15 77 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 VWC2LB2RUY7 222 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 HAX1O00165 279 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 LEPROTL1O95214 131 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 FTH1P19P0C7X4 201 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 GP9P14770 177 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 PTTG1IPP53801 180 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 GNG5P63218 68 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 CCL8P80075 99 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 SRSF6Q13247 344 aaKnown RBP10.63□□□□□ -0.71
UBE3B-209ENST00000539584 TMEM191AQ9H0A3 160 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 PRR14LQ5THK1 2151 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 TNCP24821 2201 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 SYS1-DBNDD2H3BUS1 97 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 TCF21O43680 179 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 SLC25A17O43808 307 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 GPR6P46095 362 aaPredicted RBP10.63□□□□□ -0.71
UBE3B-209ENST00000539584 RPL27AP46776 148 aaKnown RBP10.63□□□□□ -0.71
UBE3B-209ENST00000539584 FAM27E3Q08E93 113 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 PET117Q6UWS5 81 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 SRSF8Q9BRL6 282 aaKnown RBP10.63□□□□□ -0.71
UBE3B-209ENST00000539584 SSBP4Q9BWG4 385 aaPredicted RBP10.63□□□□□ -0.71
UBE3B-209ENST00000539584 Q9H3A6 140 aa10.63□□□□□ -0.71
UBE3B-209ENST00000539584 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 HSBP1L1C9JCN9 74 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 DLX6P56179 175 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 ADIPOQQ15848 244 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 TMEM155Q4W5P6 130 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 C10orf55Q5SWW7 151 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 LEMD1Q68G75 181 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 ATOH7Q8N100 152 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 FAM57AQ8TBR7 257 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 BLNKQ8WV28 456 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 URB1-AS1Q96HZ7 61 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 MS4A6AQ9H2W1 248 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 MRPL36Q9P0J6 103 aaKnown RBP10.62□□□□□ -0.71
UBE3B-209ENST00000539584 HSPB8Q9UJY1 196 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 RAI1Q7Z5J4 1906 aaPredicted RBP10.62□□□□□ -0.71
UBE3B-209ENST00000539584 CHEK1O14757 476 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 HINT1P49773 126 aaPredicted RBP10.62□□□□□ -0.71
UBE3B-209ENST00000539584 FAM120AOSQ5T036 256 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 C16orf54Q6UWD8 224 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 TCF24Q7RTU0 167 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 GATD1Q8NB37 220 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 GTSF1Q8WW33 167 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 H1FXQ92522 213 aaKnown RBP10.62□□□□□ -0.71
UBE3B-209ENST00000539584 HIGD1AQ9Y241 93 aa10.62□□□□□ -0.71
UBE3B-209ENST00000539584 LOC102724200A0A096LPH7 203 aaPredicted RBP10.61□□□□□ -0.71
UBE3B-209ENST00000539584 C16orf97H3BN30 126 aa10.61□□□□□ -0.71
UBE3B-209ENST00000539584 HLA-DRB1P01911 266 aa10.61□□□□□ -0.71
UBE3B-209ENST00000539584 CRYGBP07316 175 aa10.61□□□□□ -0.71
UBE3B-209ENST00000539584 HOXB4P17483 251 aaPredicted RBP10.61□□□□□ -0.71
UBE3B-209ENST00000539584 RPS20P60866 119 aaKnown RBP10.61□□□□□ -0.71
UBE3B-209ENST00000539584 MRGPRG-AS1Q2M3A8 158 aa10.61□□□□□ -0.71
UBE3B-209ENST00000539584 LYPD1Q8N2G4 141 aa10.61□□□□□ -0.71
UBE3B-209ENST00000539584 RNF5Q99942 180 aa10.61□□□□□ -0.71
UBE3B-209ENST00000539584 MAP1LC3CQ9BXW4 147 aa10.61□□□□□ -0.71
UBE3B-209ENST00000539584 DYSFO75923 2080 aa10.61□□□□□ -0.71
UBE3B-209ENST00000539584 PCNX2A6NKB5 2137 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.6□□□□□ -0.71
UBE3B-209ENST00000539584 IGHV1-24A0A0C4DH33 117 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 K7EP13 123 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 IGHV1-8P0DP01 117 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 COL8A1P27658 744 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 Q6AWC8 147 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 C12orf54Q6X4T0 127 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 F11RQ9Y624 299 aaKnown RBP10.6□□□□□ -0.71
UBE3B-209ENST00000539584 TNRC18O15417 2968 aaPredicted RBP10.6□□□□□ -0.71
UBE3B-209ENST00000539584 PLAUP00749 431 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 RBPJQ06330 500 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 MAJINQ3KP22 176 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 S100A7AQ86SG5 101 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 Q86TA4 180 aa10.6□□□□□ -0.71
UBE3B-209ENST00000539584 RPRMLQ8N4K4 120 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms