RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 ZNF616Q08AN1 781 aa8.25□□□□□ -1.09
LEMD3-202ENST00000539442 KIAA0141Q14154 515 aaPredicted RBP8.25□□□□□ -1.09
LEMD3-202ENST00000539442 ACOT6Q3I5F7 207 aaPredicted RBP8.25□□□□□ -1.09
LEMD3-202ENST00000539442 TIGITQ495A1 244 aa8.25□□□□□ -1.09
LEMD3-202ENST00000539442 TMEM41BQ5BJD5 291 aa8.25□□□□□ -1.09
LEMD3-202ENST00000539442 FAM74A1Q5RGS3 127 aa8.25□□□□□ -1.09
LEMD3-202ENST00000539442 CLEC19AQ6UXS0 136 aa8.25□□□□□ -1.09
LEMD3-202ENST00000539442 Q6ZRG5 221 aa8.25□□□□□ -1.09
LEMD3-202ENST00000539442 ZNF491Q8N8L2 437 aa8.25□□□□□ -1.09
LEMD3-202ENST00000539442 OR5AU1Q8NGC0 362 aa8.25□□□□□ -1.09
LEMD3-202ENST00000539442 WFDC12Q8WWY7 111 aa8.25□□□□□ -1.09
LEMD3-202ENST00000539442 UBE2E2Q96LR5 201 aa8.25□□□□□ -1.09
LEMD3-202ENST00000539442 OR2C1O95371 312 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 RPLP1P05386 114 aaKnown RBP8.24□□□□□ -1.09
LEMD3-202ENST00000539442 LINC00869P0C866 280 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 RD3LP0DJH9 198 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 ARL3P36405 182 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 PLP1P60201 277 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 RAB14P61106 215 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 RELQ04864 619 aaPredicted RBP8.24□□□□□ -1.09
LEMD3-202ENST00000539442 ZNF600Q6ZNG1 722 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 LCNL1Q6ZST4 164 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 OR51G1Q8NGK1 321 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 Q8WTZ3 238 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 SAT2Q96F10 170 aaPredicted RBP8.24□□□□□ -1.09
LEMD3-202ENST00000539442 C19orf24Q9BVV8 132 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 RNF114Q9Y508 228 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 RFNGQ9Y644 331 aa8.24□□□□□ -1.09
LEMD3-202ENST00000539442 ELOA3CA0A087WX78 387 aaPredicted RBP8.23□□□□□ -1.09
LEMD3-202ENST00000539442 YIF1AO95070 293 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 IGHV3-11P01762 117 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 LGALS1P09382 135 aaKnown RBP8.23□□□□□ -1.09
LEMD3-202ENST00000539442 PSG1P11464 419 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 GATA2P23769 480 aaPredicted RBP8.23□□□□□ -1.09
LEMD3-202ENST00000539442 ADMP35318 185 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 CDX1P47902 265 aaPredicted RBP8.23□□□□□ -1.09
LEMD3-202ENST00000539442 PROK1P58294 105 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 RAB2AP61019 212 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 BLOC1S1P78537 153 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 OR10G4Q8NGN3 311 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 OR10G9Q8NGN4 311 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 OR10G7Q8NGN6 311 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 OR1L4Q8NGR5 311 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 GATAD1Q8WUU5 269 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 PFDN5Q99471 154 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 RNF2Q99496 336 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 CHRDL1Q9BU40 450 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 RPRMQ9NS64 109 aa8.23□□□□□ -1.09
LEMD3-202ENST00000539442 PEF1Q9UBV8 284 aaKnown RBP8.23□□□□□ -1.09
LEMD3-202ENST00000539442 WI2-2373I1.2A0A1W2PRP0 233 aa8.22□□□□□ -1.09
LEMD3-202ENST00000539442 ZNF705EA8MWA4 302 aaPredicted RBP8.22□□□□□ -1.09
LEMD3-202ENST00000539442 SEC14L6B5MCN3 397 aa8.22□□□□□ -1.09
LEMD3-202ENST00000539442 FOXL1Q12952 345 aa8.22□□□□□ -1.09
LEMD3-202ENST00000539442 TCTEX1D4Q5JR98 221 aa8.22□□□□□ -1.09
LEMD3-202ENST00000539442 CLLU1Q5K131 121 aa8.22□□□□□ -1.09
LEMD3-202ENST00000539442 S100A7AQ86SG5 101 aa8.22□□□□□ -1.09
LEMD3-202ENST00000539442 RPP25LQ8N5L8 163 aaKnown RBP8.22□□□□□ -1.09
LEMD3-202ENST00000539442 C4orf3Q8WVX3 66 aa8.22□□□□□ -1.09
LEMD3-202ENST00000539442 ACTR3CQ9C0K3 210 aaPredicted RBP8.22□□□□□ -1.09
LEMD3-202ENST00000539442 VSIRQ9H7M9 311 aa8.22□□□□□ -1.09
LEMD3-202ENST00000539442 GNB4Q9HAV0 340 aa8.22□□□□□ -1.09
LEMD3-202ENST00000539442 CTXND1A0A1B0GTU2 59 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 A0A1W2PPV4 95 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 I3L521 148 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 NDUFA4O00483 81 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 COX7A2P2O60397 106 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 GGCTO75223 188 aaKnown RBP8.21□□□□□ -1.1
LEMD3-202ENST00000539442 HYPMO75409 117 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 IL4P05112 153 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 NMBP08949 121 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 OR5G3P0C626 314 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 S100A7P31151 101 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 CDC34P49427 236 aaPredicted RBP8.21□□□□□ -1.1
LEMD3-202ENST00000539442 LYZP61626 148 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 RHOBP62745 196 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 SRSF2Q01130 221 aaKnown RBP8.21□□□□□ -1.1
LEMD3-202ENST00000539442 GCSAMLQ5JQS6 135 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 FAM213BQ8TBF2 198 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 RNF125Q96EQ8 232 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 RCC1LQ96I51 464 aaKnown RBP8.21□□□□□ -1.1
LEMD3-202ENST00000539442 MRPL32Q9BYC8 188 aaKnown RBP8.21□□□□□ -1.1
LEMD3-202ENST00000539442 DNAJC4Q9NNZ3 241 aa8.21□□□□□ -1.1
LEMD3-202ENST00000539442 PUS1Q9Y606 427 aaKnown RBP eCLIP8.21□□□□□ -1.1
LEMD3-202ENST00000539442 ANKRD34BA5PLL1 514 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 PPP5D1E7EU14 171 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 TEX46H3BTG2 121 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 BMPR1BO00238 502 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 TRBV12-3P01733 135 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 HBE1P02100 147 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 H2AFB1P0C5Y9 115 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 ORM2P19652 201 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 FHITP49789 147 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 KHDC1LQ5JSQ8 128 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 C10orf113Q5VZT2 155 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 FAM122CQ6P4D5 195 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.2□□□□□ -1.1
LEMD3-202ENST00000539442 OR1B1Q8NGR6 318 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 MBD3L1Q8WWY6 194 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 TMEM37Q8WXS4 190 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 ZNF414Q96IQ9 312 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms