RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 E9PLD3 99 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 P01737 135 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 PATE4P0C8F1 98 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 IGFBP2P18065 325 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 CAMPP49913 170 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 FABP6P51161 128 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 UBE2L3P68036 154 aaKnown RBP5.41□□□□□ -1.54
USP28-207ENST00000538475 PRCDQ00LT1 54 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 AESQ08117 197 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 PCOLCEQ15113 449 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 GUSBP1Q15486 140 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 DHRS13Q6UX07 377 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 ABHD12Q8N2K0 398 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 DDB2Q92466 427 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 DAZAP1Q96EP5 407 aaKnown RBP5.41□□□□□ -1.54
USP28-207ENST00000538475 PAXXQ9BUH6 204 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 SPANXB1Q9NS25 103 aaPredicted RBP5.41□□□□□ -1.54
USP28-207ENST00000538475 TMEM140Q9NV12 185 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 WNT16Q9UBV4 365 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 PILRBQ9UKJ0 227 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 EPDR1Q9UM22 224 aa5.41□□□□□ -1.54
USP28-207ENST00000538475 BOKQ9UMX3 212 aaPredicted RBP5.41□□□□□ -1.54
USP28-207ENST00000538475 A0A1B0GUT8 65 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 A0A1W2PRD5 423 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 A0A1W2PRF3 423 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 A0A1W2PRM7 423 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.4□□□□□ -1.54
USP28-207ENST00000538475 KLRC4-KLRK1H3BQV0 150 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 C15orf65H3BRN8 121 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 K7EQM0 130 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 MGST3O14880 152 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 CXCL13O43927 109 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 FCGR3BO75015 233 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 GOSR1O95249 250 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 LTAP01374 205 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 CCL5P13501 91 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 PI4KAP42356 2102 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 CRYBA4P53673 196 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 TCTAP57738 103 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 CFHR1Q03591 330 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 CD69Q07108 199 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 SMAGPQ0VAQ4 97 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 KLRD1Q13241 179 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 TM4SF20Q53R12 229 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 ZNF841Q6ZN19 808 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 ZNF493Q6ZR52 646 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 THAP8Q8NA92 274 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 CT55Q8WUE5 264 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 ZNF488Q96MN9 340 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 SLC25A2Q9BXI2 301 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 GTSF1LQ9H1H1 148 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 IFI27L2Q9H2X8 130 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 GEMIN7Q9H840 131 aaKnown RBP5.4□□□□□ -1.54
USP28-207ENST00000538475 TSSC4Q9Y5U2 329 aaPredicted RBP5.4□□□□□ -1.54
USP28-207ENST00000538475 U3KQK5 164 aa5.4□□□□□ -1.54
USP28-207ENST00000538475 SDK2Q58EX2 2172 aa5.4□□□□□ -1.55
USP28-207ENST00000538475 RAI1Q7Z5J4 1906 aaPredicted RBP5.4□□□□□ -1.55
USP28-207ENST00000538475 BRWD1Q9NSI6 2320 aa5.4□□□□□ -1.55
USP28-207ENST00000538475 GOLGB1Q14789 3259 aaKnown RBP5.4□□□□□ -1.55
USP28-207ENST00000538475 AGRNO00468 2067 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 IGHV1-45A0A0A0MS14 117 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 LINC01546A6NGU7 62 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 COX7A2P2O60397 106 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 SCRG1O75711 98 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 KLF7O75840 302 aaPredicted RBP5.39□□□□□ -1.55
USP28-207ENST00000538475 APOHP02749 345 aaPredicted RBP5.39□□□□□ -1.55
USP28-207ENST00000538475 CCL3P10147 92 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 MEOX1P50221 254 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 NXPH1P58417 271 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 SSBP2P81877 361 aaPredicted RBP5.39□□□□□ -1.55
USP28-207ENST00000538475 LTC4SQ16873 150 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 TBC1D28Q2M2D7 210 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 LYRM7Q5U5X0 104 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 C10orf113Q5VZT2 155 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 CCDC144NLQ6NUI1 221 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 ACP7Q6ZNF0 438 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 PDPNQ86YL7 162 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 PRSS3P2Q8NHM4 247 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 PERPQ96FX8 193 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 RITA1Q96K30 269 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 R4GN57 208 aa5.39□□□□□ -1.55
USP28-207ENST00000538475 DOCK7Q96N67 2140 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 TRAV26-1A0A087WT03 109 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 A0A0G2JNJ9 132 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 SERTM2A0A1B0GWG4 89 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 VWC2LB2RUY7 222 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 TMEM262E9PQX1 116 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 H3BMG7 143 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 UPK2O00526 184 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 ACTL6BO94805 426 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 IGHG4P01861 327 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 HBDP02042 147 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 CFHR2P36980 270 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 RPS16P62249 146 aaKnown RBP5.38□□□□□ -1.55
USP28-207ENST00000538475 ERHP84090 104 aaKnown RBP5.38□□□□□ -1.55
USP28-207ENST00000538475 IL11RAQ14626 422 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 DEFB133Q30KQ1 61 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 SPINK9Q5DT21 86 aa5.38□□□□□ -1.55
USP28-207ENST00000538475 TMEM240Q5SV17 173 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms