RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 CEBPZOSA8MTT3 80 aa6.29□□□□□ -1.4
DDB1-212ENST00000538470 SULT1A3P0DMM9 295 aa6.29□□□□□ -1.4
DDB1-212ENST00000538470 SULT1A4P0DMN0 295 aa6.29□□□□□ -1.4
DDB1-212ENST00000538470 C4BPBP20851 252 aa6.29□□□□□ -1.4
DDB1-212ENST00000538470 SNRPD3P62318 126 aaKnown RBP6.29□□□□□ -1.4
DDB1-212ENST00000538470 DHRS2Q13268 280 aa6.29□□□□□ -1.4
DDB1-212ENST00000538470 NMSQ5H8A3 153 aa6.29□□□□□ -1.4
DDB1-212ENST00000538470 C16orf54Q6UWD8 224 aa6.29□□□□□ -1.4
DDB1-212ENST00000538470 CENPSQ8N2Z9 138 aa6.29□□□□□ -1.4
DDB1-212ENST00000538470 RPP25LQ8N5L8 163 aaKnown RBP6.29□□□□□ -1.4
DDB1-212ENST00000538470 C1QTNF4Q9BXJ3 329 aa6.29□□□□□ -1.4
DDB1-212ENST00000538470 DEDDO75618 318 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 TOMM40O96008 361 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 IL4P05112 153 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 GIG44P09565 113 aaPredicted RBP6.28□□□□□ -1.4
DDB1-212ENST00000538470 ANXA3P12429 323 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 ATP5IP56385 69 aaPredicted RBP6.28□□□□□ -1.4
DDB1-212ENST00000538470 NUTF2P61970 127 aaKnown RBP6.28□□□□□ -1.4
DDB1-212ENST00000538470 SUPT4H1P63272 117 aaKnown RBP6.28□□□□□ -1.4
DDB1-212ENST00000538470 SRPXP78539 464 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 USF2Q15853 346 aaPredicted RBP6.28□□□□□ -1.4
DDB1-212ENST00000538470 MLANAQ16655 118 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 PSMG4Q5JS54 123 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 ACTL10Q5JWF8 245 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 TMEM170AQ8WVE7 144 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 DEDD2Q8WXF8 326 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 S100ZQ8WXG8 99 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 GPR146Q96CH1 333 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 SLC25A21Q9BQT8 299 aaPredicted RBP6.28□□□□□ -1.4
DDB1-212ENST00000538470 CCDC32Q9BV29 185 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 NRN1Q9NPD7 142 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 PFDN2Q9UHV9 154 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 TBC1D24Q9ULP9 559 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 KCNIP3Q9Y2W7 256 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 HECTD4Q9Y4D8 3996 aa6.28□□□□□ -1.4
DDB1-212ENST00000538470 TRAV10A0A0B4J240 114 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 A0A0B4J2A0 478 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 NAP1L6A6NFF2 107 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 KNCNA6PVL3 124 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 FAM90A26D6RGX4 464 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 DEFB4AO15263 64 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 LYRM1O43325 122 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 NDUFB6O95139 128 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 NXPH3O95157 252 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 BTCP35070 178 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 PPP1R1AQ13522 171 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 ZNF846Q147U1 533 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 SMCO1Q147U7 214 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 OR8G2PQ6IF36 304 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 DTD1Q8TEA8 209 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 WDR12Q9GZL7 423 aaKnown RBP6.27□□□□□ -1.41
DDB1-212ENST00000538470 HSPB7Q9UBY9 170 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 SHPKQ9UHJ6 478 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 FLVCR2Q9UPI3 526 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 U3KQ87 197 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 X6R8D5 127 aa6.27□□□□□ -1.41
DDB1-212ENST00000538470 HERC2O95714 4834 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 DUXBA0A1W2PPF3 345 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 IGLL5B9A064 214 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 PLA2G10O15496 165 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 BUB3O43684 328 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 IFNA10P01566 189 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 AMBPP02760 352 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 FABP1P07148 127 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 RBMY1A1P0DJD3 496 aaKnown RBP6.26□□□□□ -1.41
DDB1-212ENST00000538470 RBMY1CP0DJD4 496 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 RD3LP0DJH9 198 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 HLA-DRB4P13762 266 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 ANXA7P20073 488 aaKnown RBP6.26□□□□□ -1.41
DDB1-212ENST00000538470 HLA-DMBP28068 263 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 NKX2-1P43699 371 aaPredicted RBP6.26□□□□□ -1.41
DDB1-212ENST00000538470 RBMY1FQ15415 496 aaKnown RBP6.26□□□□□ -1.41
DDB1-212ENST00000538470 C4orf46Q504U0 113 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 TMEM128Q5BJH2 165 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 SAMD13Q5VXD3 122 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 SIGLEC15Q6ZMC9 328 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 LINC00299Q6ZSB3 139 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 LYZL2Q7Z4W2 148 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 LGI3Q8N145 548 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 CSNK1G2-AS1Q8NCQ2 148 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 OR51G1Q8NGK1 321 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 NPIPB3Q92617 1050 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 RNF125Q96EQ8 232 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 ACY3Q96HD9 319 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 RAB40CQ96S21 281 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 C7orf50Q9BRJ6 194 aaKnown RBP6.26□□□□□ -1.41
DDB1-212ENST00000538470 RNF126Q9BV68 326 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 C20orf85Q9H1P6 137 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 APLNQ9ULZ1 77 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 HLA-DRB4X5D2U9 266 aa6.26□□□□□ -1.41
DDB1-212ENST00000538470 TRAV6A0A075B6T7 132 aa6.25□□□□□ -1.41
DDB1-212ENST00000538470 PSG1P11464 419 aa6.25□□□□□ -1.41
DDB1-212ENST00000538470 C1orf194Q5T5A4 169 aa6.25□□□□□ -1.41
DDB1-212ENST00000538470 Q6ZTC4 211 aa6.25□□□□□ -1.41
DDB1-212ENST00000538470 SLC35E1Q96K37 410 aa6.25□□□□□ -1.41
DDB1-212ENST00000538470 NEU1Q99519 415 aa6.25□□□□□ -1.41
DDB1-212ENST00000538470 NUDT15Q9NV35 164 aa6.25□□□□□ -1.41
DDB1-212ENST00000538470 IGHV4-4A0A075B6R2 117 aa6.24□□□□□ -1.41
DDB1-212ENST00000538470 ELOA3CA0A087WX78 387 aaPredicted RBP6.24□□□□□ -1.41
DDB1-212ENST00000538470 TEX48A0A1B0GUV7 120 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms