RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 LINC01619G3V211 115 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 CFHR2P36980 270 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 CIARTQ8N365 385 aaPredicted RBP4.37□□□□□ -1.71
LRP6-203ENST00000538239 SMIM12Q96EX1 92 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 SCGB3A1Q96QR1 104 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 HIST1H4GQ99525 98 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 GPR61Q9BZJ8 451 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 C11orf68Q9H3H3 251 aaKnown RBP4.37□□□□□ -1.71
LRP6-203ENST00000538239 YLPM1P49750 1951 aaKnown RBP4.37□□□□□ -1.71
LRP6-203ENST00000538239 TRGV1A0A0A0MS02 117 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 ATP6V0E1O15342 81 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 DEFB113Q30KQ7 82 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 FOXL2NBQ6ZUU3 175 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 ASCL2Q99929 193 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 EPDR1Q9UM22 224 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 PSG8Q9UQ74 426 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 HEATR1Q9H583 2144 aaKnown RBP4.37□□□□□ -1.71
LRP6-203ENST00000538239 NDUFS7O75251 213 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 ZNF25P17030 456 aaPredicted RBP4.37□□□□□ -1.71
LRP6-203ENST00000538239 SPSB3Q6PJ21 355 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 TMEM183AQ8IXX5 376 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 HS3ST6Q96QI5 342 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 RNF5Q99942 180 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 SLC25A39Q9BZJ4 359 aaPredicted RBP4.37□□□□□ -1.71
LRP6-203ENST00000538239 RNASE7Q9H1E1 156 aaKnown RBP4.37□□□□□ -1.71
LRP6-203ENST00000538239 A6NDN8 102 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 PSCAO43653 123 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 SOD3P08294 240 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 SPATA45Q537H7 98 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 NHLRC3Q5JS37 347 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 DTX2Q86UW9 622 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 EXOC3-AS1Q8N2X6 119 aa4.37□□□□□ -1.71
LRP6-203ENST00000538239 CACNA1BQ00975 2339 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 TPRP12270 2363 aaKnown RBP4.36□□□□□ -1.71
LRP6-203ENST00000538239 A0A1B0GUT8 65 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 APOHP02749 345 aaPredicted RBP4.36□□□□□ -1.71
LRP6-203ENST00000538239 EFNB3Q15768 340 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 ZNF506Q5JVG8 444 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 PAPPA-AS1Q5QFB9 102 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 Q6ZR03 302 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 TP53BP1Q12888 1972 aaPredicted RBP4.36□□□□□ -1.71
LRP6-203ENST00000538239 SNRNP200O75643 2136 aaKnown RBP4.36□□□□□ -1.71
LRP6-203ENST00000538239 COL4A4P53420 1690 aaPredicted RBP4.36□□□□□ -1.71
LRP6-203ENST00000538239 OVOL3O00110 214 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 EVI2AP22794 236 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 FAM120AOSQ5T036 256 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 GFI1BQ5VTD9 330 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 MRAPQ8TCY5 172 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 PRADC1Q9BSG0 188 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 CHCHD5Q9BSY4 110 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 ST20Q9HBF5 79 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 A0A1B0GWJ7 208 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 TMEM50AO95807 157 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 EFNB1P98172 346 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 SPATA31B1PQ5VZV4 182 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 ATOH7Q8N100 152 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 IL36BQ9NZH7 164 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 J3QLI3 93 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 TMEM136Q6ZRR5 245 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 IMMP2LQ96T52 175 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 SLX1AQ9BQ83 275 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 PRDM13Q9H4Q3 707 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 PHF3Q92576 2039 aaKnown RBP4.36□□□□□ -1.71
LRP6-203ENST00000538239 LOC107984156A0A0G2JMH3 177 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 IGKV1-16P04430 117 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 ARL17AQ8IVW1 177 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 DMRTC2Q8IXT2 367 aaPredicted RBP4.36□□□□□ -1.71
LRP6-203ENST00000538239 PUSL1Q8N0Z8 303 aaKnown RBP4.36□□□□□ -1.71
LRP6-203ENST00000538239 RHPN1-AS1Q9BWJ2 59 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 DOCK9Q9BZ29 2069 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 MED12Q93074 2177 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 NPIPB5A8MRT5 1133 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 NDUFA3O95167 84 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 VSIRQ9H7M9 311 aa4.36□□□□□ -1.71
LRP6-203ENST00000538239 HIGD1CA8MV81 97 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 G3V318 75 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 H3BRM9 83 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 Q8TCH9 128 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 COPS9Q8WXC6 57 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 ZNF524Q96C55 264 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 RNF126Q9BV68 326 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 WFDC1Q9HC57 220 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 TMEM238LA0A1B0GVL6 79 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 A6NJY4 79 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 SHISA9B4DS77 424 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 BTCP35070 178 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 TREML4Q6UXN2 200 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 FOXC2Q99958 501 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 TRBV9A0A0B4J1U6 114 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 ADARB2-AS1A8MUL3 147 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 COL4A3Q01955 1670 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 SRRM4A7MD48 611 aaKnown RBP4.35□□□□□ -1.71
LRP6-203ENST00000538239 CIDEAO60543 219 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 NAPSAO96009 420 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 FOLR2P14207 255 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 DEFB131AP59861 70 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 CFHR3Q02985 330 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 LCN12Q6JVE5 192 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 MGST2Q99735 147 aa4.35□□□□□ -1.71
LRP6-203ENST00000538239 JKAMPQ9P055 326 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms