RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 FAM90A20PA6NIJ5 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A8PA6NJQ4 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A7PA6NKC0 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A22PA8MWA6 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A12PA8MX19 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A5PA8MXJ8 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A23PA8MXZ1 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A15PP0C7V4 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A13PP0C7W8 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A14PP0C7W9 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A24PP0C7X0 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 Q6ZVH6 145 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 Q8NFD4 153 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 GFI1Q99684 422 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 TM2D1Q9BX74 207 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 IGKV3-20P01619 116 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 DDB2Q92466 427 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 CFHR5Q9BXR6 569 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 RAMP3O60896 148 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 IL9P15248 144 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 BVES-AS1Q5T3Y7 98 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 RPRMLQ8N4K4 120 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 SCRT1Q9BWW7 348 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 TOMM7Q9P0U1 55 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV3OR16-13A0A075B7E8 117 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV3-74A0A0B4J1X5 117 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 IGKV1-8A0A0C4DH67 115 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 ZNF114Q8NC26 417 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 GGTLC1Q9BX51 225 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 IGKV1D-42A0A075B6H8 117 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 A0A1W2PS18 150 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 CCL3P10147 92 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 ZNF138P52744 262 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 TRAV24A0A0B4J272 114 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 A0A0U1RRA0 63 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 A0A1W2PPV9 198 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 MGST3O14880 152 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 LDLRAD1Q5T700 205 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 MPV17P39210 176 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 C10orf91Q5T1B1 145 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 SPINK14Q6IE38 97 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 PHLDA1Q8WV24 401 aaPredicted RBP4.75□□□□□ -1.65
CSMD1-215ENST00000537824 RAX2Q96IS3 184 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 ASCL2Q99929 193 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 FBXL15Q9H469 300 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 A0A1W2PPM0 123 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 PSG4Q00888 419 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 ORMDL2Q53FV1 153 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 PPBPP02775 128 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 EGR4Q05215 589 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 CCDC144NLQ6NUI1 221 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 UNQ6494/PRO21346Q6UXR6 183 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 TNFRSF18Q9Y5U5 241 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 PRB4P10163 310 aaPredicted RBP4.75□□□□□ -1.65
CSMD1-215ENST00000537824 FXYD7P58549 80 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 H7C1H1 209 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 LILRA1O75019 489 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 CEACAM4O75871 244 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 IFI27P40305 119 aaPredicted RBP4.75□□□□□ -1.65
CSMD1-215ENST00000537824 ASIPP42127 132 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 PMVKQ15126 192 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 PMS2CLQ68D20 193 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 CELA3AP09093 270 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 IGLC2P0DOY2 106 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 IGLC3P0DOY3 106 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 SLAQ13239 276 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 GUSBP11Q6P575 273 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 TEX43Q6ZNM6 134 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 OR5P3Q8WZ94 311 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 SF3B5Q9BWJ5 86 aaKnown RBP4.75□□□□□ -1.65
CSMD1-215ENST00000537824 SRSF1Q07955 248 aaKnown RBP eCLIP4.75□□□□□ -1.65
CSMD1-215ENST00000537824 NUP35Q8NFH5 326 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 IGKV1D-13A0A0B4J2D9 117 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.75□□□□□ -1.65
CSMD1-215ENST00000537824 IGKV1-13P0DP09 117 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 BPTFQ12830 3046 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 PAPPA2Q9BXP8 1791 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.75□□□□□ -1.65
CSMD1-215ENST00000537824 SMKR1H3BMG3 65 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 GFRALQ6UXV0 394 aa4.75□□□□□ -1.65
CSMD1-215ENST00000537824 IGKV3D-20A0A0C4DH25 116 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 PEBP1P30086 187 aaKnown RBP4.74□□□□□ -1.65
CSMD1-215ENST00000537824 RSPO4Q2I0M5 234 aaPredicted RBP4.74□□□□□ -1.65
CSMD1-215ENST00000537824 RASL10BQ96S79 203 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 PRDM14Q9GZV8 571 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 IDI2-AS1Q9NZ38 188 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 MMP23AO75900 390 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 PYYP10082 97 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 FGF11Q92914 225 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 KCNK17Q96T54 332 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 SMPXQ9UHP9 88 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 ZNF625Q96I27 306 aaPredicted RBP4.74□□□□□ -1.65
CSMD1-215ENST00000537824 C1QTNF4Q9BXJ3 329 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 CLEC7AQ9BXN2 247 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 TMEM126AQ9H061 195 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 RBM3P98179 157 aaKnown RBP4.74□□□□□ -1.65
CSMD1-215ENST00000537824 SLC25A20O43772 301 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 PCSK5Q92824 1860 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 SHANK3Q9BYB0 1731 aa4.74□□□□□ -1.65
CSMD1-215ENST00000537824 hCG_38984A0A1B0GV85 526 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms