RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CORTO00230 105 aa11.47□□□□□ -0.57
USP44-203ENST00000537435 GDF5OSQ5U4N7 250 aa11.47□□□□□ -0.57
USP44-203ENST00000537435 PVRIGQ6DKI7 326 aa11.47□□□□□ -0.57
USP44-203ENST00000537435 C22orf15Q8WYQ4 148 aa11.47□□□□□ -0.57
USP44-203ENST00000537435 ADGRG4Q8IZF6 3080 aa11.47□□□□□ -0.57
USP44-203ENST00000537435 AKAP13Q12802 2813 aa11.46□□□□□ -0.57
USP44-203ENST00000537435 HIST1H1EP10412 219 aaKnown RBP11.46□□□□□ -0.57
USP44-203ENST00000537435 FAM19A2Q8N3H0 131 aa11.46□□□□□ -0.57
USP44-203ENST00000537435 C18orf32Q8TCD1 76 aa11.46□□□□□ -0.57
USP44-203ENST00000537435 TSKUQ8WUA8 353 aa11.46□□□□□ -0.57
USP44-203ENST00000537435 NEU1Q99519 415 aa11.46□□□□□ -0.57
USP44-203ENST00000537435 NGBQ9NPG2 151 aa11.46□□□□□ -0.57
USP44-203ENST00000537435 ZNF835Q9Y2P0 537 aa11.46□□□□□ -0.57
USP44-203ENST00000537435 IGHV2-26A0A0B4J1V2 119 aa11.46□□□□□ -0.58
USP44-203ENST00000537435 CRYGBP07316 175 aa11.46□□□□□ -0.58
USP44-203ENST00000537435 NBEAP1P0C6P0 100 aa11.46□□□□□ -0.58
USP44-203ENST00000537435 SPACA3Q8IXA5 215 aa11.46□□□□□ -0.58
USP44-203ENST00000537435 TMEM116Q8NCL8 245 aa11.46□□□□□ -0.58
USP44-203ENST00000537435 CHRDL1Q9BU40 450 aa11.46□□□□□ -0.58
USP44-203ENST00000537435 SIGLEC9Q9Y336 463 aa11.46□□□□□ -0.58
USP44-203ENST00000537435 HIGD1CA8MV81 97 aa11.45□□□□□ -0.58
USP44-203ENST00000537435 HYPMO75409 117 aa11.45□□□□□ -0.58
USP44-203ENST00000537435 PRR30Q53SZ7 412 aaPredicted RBP11.45□□□□□ -0.58
USP44-203ENST00000537435 NIT1Q86X76 327 aa11.45□□□□□ -0.58
USP44-203ENST00000537435 RIF1Q5UIP0 2472 aaKnown RBP11.45□□□□□ -0.58
USP44-203ENST00000537435 ACACAQ13085 2346 aa11.45□□□□□ -0.58
USP44-203ENST00000537435 FAM87AP0C7U9 286 aa11.45□□□□□ -0.58
USP44-203ENST00000537435 NTF3P20783 257 aa11.45□□□□□ -0.58
USP44-203ENST00000537435 LEMD1Q68G75 181 aa11.45□□□□□ -0.58
USP44-203ENST00000537435 OR4B1Q8NGF8 309 aa11.45□□□□□ -0.58
USP44-203ENST00000537435 TNFRSF14Q92956 283 aa11.45□□□□□ -0.58
USP44-203ENST00000537435 GSX1Q9H4S2 264 aaPredicted RBP11.45□□□□□ -0.58
USP44-203ENST00000537435 INSIG2Q9Y5U4 225 aa11.45□□□□□ -0.58
USP44-203ENST00000537435 IGHV1-3A0A0C4DH29 117 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 LYNX1G3V0Z9 82 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 H3BTX0 84 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 IGLV1-47P01700 117 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 LYNX1P0DP58 116 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 APOBEC3AP31941 199 aaPredicted RBP11.44□□□□□ -0.58
USP44-203ENST00000537435 PRRX1P54821 245 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 GPR82Q96P67 336 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 MRPL27Q9P0M9 148 aaKnown RBP11.44□□□□□ -0.58
USP44-203ENST00000537435 RALYQ9UKM9 306 aaKnown RBP11.44□□□□□ -0.58
USP44-203ENST00000537435 KLF12Q9Y4X4 402 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 ATMQ13315 3056 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 VWC2LB2RUY7 222 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 M0QZK8 103 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 C3orf79P0CE67 100 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 GP9P14770 177 aa11.44□□□□□ -0.58
USP44-203ENST00000537435 SSBP4Q9BWG4 385 aaPredicted RBP11.44□□□□□ -0.58
USP44-203ENST00000537435 GPR6P46095 362 aaPredicted RBP11.43□□□□□ -0.58
USP44-203ENST00000537435 CAMPP49913 170 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 CASP6P55212 293 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 LINC00322Q6ZN03 302 aaPredicted RBP11.43□□□□□ -0.58
USP44-203ENST00000537435 MRPL52Q86TS9 123 aaKnown RBP11.43□□□□□ -0.58
USP44-203ENST00000537435 PPP1R27Q86WC6 154 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 C8orf46Q8TAG6 207 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 SMIM12Q96EX1 92 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 F11RQ9Y624 299 aaKnown RBP11.43□□□□□ -0.58
USP44-203ENST00000537435 GVINP1Q7Z2Y8 2422 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 ZNF292O60281 2723 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 BUB1B-PAK6H3BSN5 160 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 TCF24Q7RTU0 167 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 C5orf17Q8NAS9 161 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 MLST8Q9BVC4 326 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 CLEC7AQ9BXN2 247 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 Q9H3A6 140 aa11.43□□□□□ -0.58
USP44-203ENST00000537435 B9A039 149 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 TEX22C9J3V5 150 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 COX7A1P24310 79 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 CA7P43166 264 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 PLP1P60201 277 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 BORCS7Q96B45 105 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 FBXL15Q9H469 300 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 ANKRD11Q6UB99 2663 aaPredicted RBP11.42□□□□□ -0.58
USP44-203ENST00000537435 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.42□□□□□ -0.58
USP44-203ENST00000537435 TOMM40O96008 361 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 CD3EP07766 207 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 G0S2P27469 103 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 CTRLP40313 264 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 SPATA45Q537H7 98 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 ATP5L2Q7Z4Y8 100 aa11.42□□□□□ -0.58
USP44-203ENST00000537435 A0A1B0GXF2 115 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 OR2J3O76001 311 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 TCRAP04437 139 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 LYZP61626 148 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 PAX2Q02962 417 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 KLF5Q13887 457 aaPredicted RBP11.41□□□□□ -0.58
USP44-203ENST00000537435 PRR31Q5SQ13 230 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 FMC1Q96HJ9 113 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 ALKBH7Q9BT30 221 aaPredicted RBP11.41□□□□□ -0.58
USP44-203ENST00000537435 RPP21Q9H633 154 aaKnown RBP11.41□□□□□ -0.58
USP44-203ENST00000537435 HIGD1AQ9Y241 93 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 HSBP1O75506 76 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 LTAP01374 205 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 RPLP1P05386 114 aaKnown RBP11.41□□□□□ -0.58
USP44-203ENST00000537435 PSG1P11464 419 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 SRSF12Q8WXF0 261 aaKnown RBP11.41□□□□□ -0.58
USP44-203ENST00000537435 RPEQ96AT9 228 aa11.41□□□□□ -0.58
USP44-203ENST00000537435 DMXL2Q8TDJ6 3036 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms