RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 OR2F1Q13607 317 aa10.51□□□□□ -0.73
UBE3B-206ENST00000536398 OR4D5Q8NGN0 318 aa10.51□□□□□ -0.73
UBE3B-206ENST00000536398 GLMPQ8WWB7 406 aa10.51□□□□□ -0.73
UBE3B-206ENST00000536398 C20orf85Q9H1P6 137 aa10.51□□□□□ -0.73
UBE3B-206ENST00000536398 LYSTQ99698 3801 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 TRAV6A0A075B6T7 132 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 TRAV2A0A0B4J234 112 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 KIR2DL5BA0A0G2JN68 375 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 KIR2DL5BA0A0G2JPC4 375 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 K7EQG2 157 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 SPRY2O43597 315 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 TCRBP04435 133 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 CMC4P56277 68 aaPredicted RBP10.5□□□□□ -0.73
UBE3B-206ENST00000536398 GSG1LQ6UXU4 331 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 Q6ZWC4 215 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 KIR2DL5AQ8N109 375 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 STPG3Q8N7X2 389 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 KIR2DL5BQ8NHK3 375 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 MITD1Q8WV92 249 aa10.5□□□□□ -0.73
UBE3B-206ENST00000536398 NARS2Q96I59 477 aaKnown RBP10.5□□□□□ -0.73
UBE3B-206ENST00000536398 CIB3Q96Q77 187 aaPredicted RBP10.5□□□□□ -0.73
UBE3B-206ENST00000536398 UBE2CO00762 179 aa10.49□□□□□ -0.73
UBE3B-206ENST00000536398 BUB3O43684 328 aa10.49□□□□□ -0.73
UBE3B-206ENST00000536398 IFNA21P01568 189 aa10.49□□□□□ -0.73
UBE3B-206ENST00000536398 ZNF688P0C7X2 276 aa10.49□□□□□ -0.73
UBE3B-206ENST00000536398 NKX2-1P43699 371 aaPredicted RBP10.49□□□□□ -0.73
UBE3B-206ENST00000536398 EWSR1Q01844 656 aaKnown RBP eCLIP10.49□□□□□ -0.73
UBE3B-206ENST00000536398 DCANP1Q8TF63 244 aa10.49□□□□□ -0.73
UBE3B-206ENST00000536398 RNF183Q96D59 192 aa10.49□□□□□ -0.73
UBE3B-206ENST00000536398 RNF125Q96EQ8 232 aa10.49□□□□□ -0.73
UBE3B-206ENST00000536398 GRAMD2BQ96HH9 432 aa10.49□□□□□ -0.73
UBE3B-206ENST00000536398 PBDC1Q9BVG4 233 aa10.49□□□□□ -0.73
UBE3B-206ENST00000536398 CSTL1Q9H114 145 aa10.49□□□□□ -0.73
UBE3B-206ENST00000536398 PLECQ15149 4684 aaKnown RBP10.48□□□□□ -0.73
UBE3B-206ENST00000536398 TENM2Q9NT68 2774 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 KNCNA6PVL3 124 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 CCSO14618 274 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 SSSCA1O60232 199 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 CCNKO75909 580 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 PAX9P55771 341 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 IAH1Q2TAA2 248 aaPredicted RBP10.48□□□□□ -0.73
UBE3B-206ENST00000536398 TMEM182Q6ZP80 229 aaPredicted RBP10.48□□□□□ -0.73
UBE3B-206ENST00000536398 THAP8Q8NA92 274 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 SEC22CQ9BRL7 303 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 CCDC32Q9BV29 185 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 PSENENQ9NZ42 101 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 GSKIPQ9P0R6 139 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 TBC1D24Q9ULP9 559 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
UBE3B-206ENST00000536398 STRAPQ9Y3F4 350 aaKnown RBP10.48□□□□□ -0.73
UBE3B-206ENST00000536398 A0A0J9YWU9 116 aa10.47□□□□□ -0.73
UBE3B-206ENST00000536398 SCGB1D2O95969 90 aa10.47□□□□□ -0.73
UBE3B-206ENST00000536398 GATA2P23769 480 aaPredicted RBP10.47□□□□□ -0.73
UBE3B-206ENST00000536398 EIF2B2P49770 351 aaKnown RBP10.47□□□□□ -0.73
UBE3B-206ENST00000536398 LYZP61626 148 aa10.47□□□□□ -0.73
UBE3B-206ENST00000536398 RPP30P78346 268 aaKnown RBP10.47□□□□□ -0.73
UBE3B-206ENST00000536398 ZBTB8BQ8NAP8 495 aaPredicted RBP10.47□□□□□ -0.73
UBE3B-206ENST00000536398 TRGV9Q99603 122 aa10.47□□□□□ -0.73
UBE3B-206ENST00000536398 NUDT15Q9NV35 164 aa10.47□□□□□ -0.73
UBE3B-206ENST00000536398 HELTA6NFD8 242 aa10.46□□□□□ -0.73
UBE3B-206ENST00000536398 PMS2P5A8MQ11 134 aa10.46□□□□□ -0.73
UBE3B-206ENST00000536398 SNRPGP15A8MWD9 76 aa10.46□□□□□ -0.73
UBE3B-206ENST00000536398 SIGLEC15Q6ZMC9 328 aa10.46□□□□□ -0.73
UBE3B-206ENST00000536398 ACOT7LQ6ZUV0 252 aa10.46□□□□□ -0.73
UBE3B-206ENST00000536398 SMIM8Q96KF7 97 aa10.46□□□□□ -0.73
UBE3B-206ENST00000536398 MBPP02686 304 aaPredicted RBP10.45□□□□□ -0.74
UBE3B-206ENST00000536398 GIG44P09565 113 aaPredicted RBP10.45□□□□□ -0.74
UBE3B-206ENST00000536398 H2AFB2P0C5Z0 115 aa10.45□□□□□ -0.74
UBE3B-206ENST00000536398 IFITM3Q01628 133 aa10.45□□□□□ -0.74
UBE3B-206ENST00000536398 PSMG4Q5JS54 123 aa10.45□□□□□ -0.74
UBE3B-206ENST00000536398 ACTL10Q5JWF8 245 aa10.45□□□□□ -0.74
UBE3B-206ENST00000536398 OR8G2PQ6IF36 304 aa10.45□□□□□ -0.74
UBE3B-206ENST00000536398 LINC00299Q6ZSB3 139 aa10.45□□□□□ -0.74
UBE3B-206ENST00000536398 STHQ8IWL8 128 aa10.45□□□□□ -0.74
UBE3B-206ENST00000536398 ZNF431Q8TF32 576 aaPredicted RBP10.45□□□□□ -0.74
UBE3B-206ENST00000536398 S100ZQ8WXG8 99 aa10.45□□□□□ -0.74
UBE3B-206ENST00000536398 RCL1Q9Y2P8 373 aaKnown RBP10.45□□□□□ -0.74
UBE3B-206ENST00000536398 HYDINQ4G0P3 5121 aa10.45□□□□□ -0.74
UBE3B-206ENST00000536398 FAM240BA0A1B0GVZ2 78 aa10.44□□□□□ -0.74
UBE3B-206ENST00000536398 CA1P00915 261 aaPredicted RBP10.44□□□□□ -0.74
UBE3B-206ENST00000536398 METTL15P1P0C7V9 234 aa10.44□□□□□ -0.74
UBE3B-206ENST00000536398 AP2S1P53680 142 aaPredicted RBP10.44□□□□□ -0.74
UBE3B-206ENST00000536398 DEFB1P60022 68 aa10.44□□□□□ -0.74
UBE3B-206ENST00000536398 RRAS2P62070 204 aaPredicted RBP10.44□□□□□ -0.74
UBE3B-206ENST00000536398 AKR1C1Q04828 323 aa10.44□□□□□ -0.74
UBE3B-206ENST00000536398 TMEM14EPQ6UXP3 125 aa10.44□□□□□ -0.74
UBE3B-206ENST00000536398 TRPT1Q86TN4 253 aaKnown RBP10.44□□□□□ -0.74
UBE3B-206ENST00000536398 RAB40CQ96S21 281 aa10.44□□□□□ -0.74
UBE3B-206ENST00000536398 WDR12Q9GZL7 423 aaKnown RBP10.44□□□□□ -0.74
UBE3B-206ENST00000536398 NRN1Q9NPD7 142 aa10.44□□□□□ -0.74
UBE3B-206ENST00000536398 AGRNO00468 2067 aa10.44□□□□□ -0.74
UBE3B-206ENST00000536398 SMCO3A2RU48 225 aa10.43□□□□□ -0.74
UBE3B-206ENST00000536398 FAM25EA8MYX2 175 aa10.43□□□□□ -0.74
UBE3B-206ENST00000536398 FABP1P07148 127 aa10.43□□□□□ -0.74
UBE3B-206ENST00000536398 ARL16Q0P5N6 197 aa10.43□□□□□ -0.74
UBE3B-206ENST00000536398 ASAH1Q13510 395 aa10.43□□□□□ -0.74
UBE3B-206ENST00000536398 C12orf45Q8N5I9 185 aaPredicted RBP10.43□□□□□ -0.74
UBE3B-206ENST00000536398 IL17DQ8TAD2 202 aa10.43□□□□□ -0.74
UBE3B-206ENST00000536398 C7orf66A4D0T2 115 aa10.42□□□□□ -0.74
UBE3B-206ENST00000536398 UPK1BO75841 260 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms