RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 PROCRQ9UNN8 238 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 MUC21A0A0G2JKD1 596 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 MUC21A0A140T8X8 626 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 FAM87AP0C7U9 286 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 TNFSF4P23510 183 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 S100A7P31151 101 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 ERHP84090 104 aaKnown RBP10.8□□□□□ -0.68
HDAC4-214ENST00000535493 MUC21Q5SSG8 566 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 SLC25A48Q6ZT89 311 aaKnown RBP10.8□□□□□ -0.68
HDAC4-214ENST00000535493 ANKRD11Q6UB99 2663 aaPredicted RBP10.8□□□□□ -0.68
HDAC4-214ENST00000535493 TNFAIP6P98066 277 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-214ENST00000535493 SEM1Q6ZVN7 128 aa10.79□□□□□ -0.68
HDAC4-214ENST00000535493 ZNF835Q9Y2P0 537 aa10.79□□□□□ -0.68
HDAC4-214ENST00000535493 RIF1Q5UIP0 2472 aaKnown RBP10.79□□□□□ -0.68
HDAC4-214ENST00000535493 WNK2Q9Y3S1 2297 aa10.79□□□□□ -0.68
HDAC4-214ENST00000535493 A0A087X0K7 114 aa10.79□□□□□ -0.68
HDAC4-214ENST00000535493 DLL1O00548 723 aa10.79□□□□□ -0.68
HDAC4-214ENST00000535493 POU2AF1Q16633 256 aa10.79□□□□□ -0.68
HDAC4-214ENST00000535493 TMEM177Q53S58 311 aa10.79□□□□□ -0.68
HDAC4-214ENST00000535493 OR1L8Q8NGR8 309 aa10.79□□□□□ -0.68
HDAC4-214ENST00000535493 RNF7Q9UBF6 113 aa10.79□□□□□ -0.68
HDAC4-214ENST00000535493 RPUSD1Q9UJJ7 312 aaKnown RBP10.79□□□□□ -0.68
HDAC4-214ENST00000535493 EPDR1Q9UM22 224 aa10.79□□□□□ -0.68
HDAC4-214ENST00000535493 IGHV1-69-2A0A0G2JMI3 117 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 C22orf46C9J442 243 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 CDX4O14627 284 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-214ENST00000535493 SLC25A17O43808 307 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 LEPROTL1O95214 131 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 TOMM40O96008 361 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 HIST1H1EP10412 219 aaKnown RBP10.78□□□□□ -0.68
HDAC4-214ENST00000535493 PDPNQ86YL7 162 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 WIPF2Q8TF74 440 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-214ENST00000535493 FLYWCH2Q96CP2 140 aaKnown RBP10.78□□□□□ -0.68
HDAC4-214ENST00000535493 ADTRPQ96IZ2 230 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 C7orf69Q9H7B7 122 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 ZNF430Q9H8G1 570 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-214ENST00000535493 PLSCR4Q9NRQ2 329 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 ACACAQ13085 2346 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 MED13LQ71F56 2210 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 FNDC10F2Z333 226 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 FSTL3O95633 263 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 PSG1P11464 419 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 ZNF474Q6S9Z5 364 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-214ENST00000535493 CIARTQ8N365 385 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-214ENST00000535493 NBASA2RRP1 2371 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 IGHV2-70DA0A0C4DH43 119 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 PRR33A8MZF0 331 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 SYS1-DBNDD2H3BUS1 97 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 KLK10O43240 276 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 IGHV1-46P01743 117 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 HBBP68871 147 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 MZT1Q08AG7 82 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 KLF5Q13887 457 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-214ENST00000535493 LDLRAD2Q5SZI1 272 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-214ENST00000535493 H1FXQ92522 213 aaKnown RBP10.78□□□□□ -0.68
HDAC4-214ENST00000535493 C19orf24Q9BVV8 132 aa10.78□□□□□ -0.68
HDAC4-214ENST00000535493 MRPL32Q9BYC8 188 aaKnown RBP10.78□□□□□ -0.68
HDAC4-214ENST00000535493 ZFHX3Q15911 3703 aa10.77□□□□□ -0.68
HDAC4-214ENST00000535493 ENSAO43768 121 aaKnown RBP10.77□□□□□ -0.69
HDAC4-214ENST00000535493 FCN3O75636 299 aa10.77□□□□□ -0.69
HDAC4-214ENST00000535493 IGHG3P01860 377 aa10.77□□□□□ -0.69
HDAC4-214ENST00000535493 CFHR2P36980 270 aa10.77□□□□□ -0.69
HDAC4-214ENST00000535493 FAM231DQ6ZW35 169 aa10.77□□□□□ -0.69
HDAC4-214ENST00000535493 TPPP3Q9BW30 176 aa10.77□□□□□ -0.69
HDAC4-214ENST00000535493 A0A1B0GXF2 115 aa10.77□□□□□ -0.69
HDAC4-214ENST00000535493 TCRBV4S1A1TA0A5B7 111 aa10.77□□□□□ -0.69
HDAC4-214ENST00000535493 FXYD7P58549 80 aa10.77□□□□□ -0.69
HDAC4-214ENST00000535493 FAM27E3Q08E93 113 aa10.77□□□□□ -0.69
HDAC4-214ENST00000535493 AMMECR1LQ6DCA0 310 aa10.77□□□□□ -0.69
HDAC4-214ENST00000535493 APC2O95996 2303 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 A0A1W2PRD5 423 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 A0A1W2PRF3 423 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 A0A1W2PRM7 423 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 TAX1BP3O14907 124 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 P01737 135 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 NBEAP1P0C6P0 100 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 EXOC3-AS1Q8N2X6 119 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 TEX45Q8NA69 505 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 C1orf162Q8NEQ5 155 aaPredicted RBP10.76□□□□□ -0.69
HDAC4-214ENST00000535493 OR10X1Q8NGY0 326 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 ABCA4P78363 2273 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 hADV38S2A0JD32 116 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 OR2J3O76001 311 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 APOA2P02652 100 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 ZNF714Q96N38 554 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 GPR82Q96P67 336 aa10.76□□□□□ -0.69
HDAC4-214ENST00000535493 RPP21Q9H633 154 aaKnown RBP10.76□□□□□ -0.69
HDAC4-214ENST00000535493 A0A1W2PPI3 338 aa10.75□□□□□ -0.69
HDAC4-214ENST00000535493 CNTFRP26992 372 aa10.75□□□□□ -0.69
HDAC4-214ENST00000535493 ZNF788Q6ZQV5 615 aa10.75□□□□□ -0.69
HDAC4-214ENST00000535493 CACNG8Q8WXS5 425 aa10.75□□□□□ -0.69
HDAC4-214ENST00000535493 NAA38Q9BRA0 125 aaKnown RBP10.75□□□□□ -0.69
HDAC4-214ENST00000535493 TMUB1Q9BVT8 246 aa10.75□□□□□ -0.69
HDAC4-214ENST00000535493 MALRD1Q5VYJ5 2156 aa10.75□□□□□ -0.69
HDAC4-214ENST00000535493 ZGRF1Q86YA3 2104 aa10.75□□□□□ -0.69
HDAC4-214ENST00000535493 GLRXP35754 106 aa10.75□□□□□ -0.69
HDAC4-214ENST00000535493 BPIFB3P59826 476 aa10.75□□□□□ -0.69
HDAC4-214ENST00000535493 BVES-AS1Q5T3Y7 98 aa10.75□□□□□ -0.69
HDAC4-214ENST00000535493 SARAFQ96BY9 339 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms