RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 MSMBP08118 114 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 RNASE2P10153 161 aaKnown RBP4.51□□□□□ -1.69
CHKA-208ENST00000533910 CNTFRP26992 372 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 DLK1P80370 383 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 SSBP2P81877 361 aaPredicted RBP4.51□□□□□ -1.69
CHKA-208ENST00000533910 WT1-ASQ06250 92 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 CLEC12BQ2HXU8 276 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 C5orf64Q2M2E5 130 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 ODF3L2Q3SX64 289 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 AKIRIN2Q53H80 203 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 C2orf83Q53S99 150 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 C6orf226Q5I0X4 101 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 C10orf55Q5SWW7 151 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 PXDC1Q5TGL8 231 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 PVRIGQ6DKI7 326 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 OR8G2PQ6IF36 304 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 TEX38Q6PEX7 206 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 CD164L2Q6UWJ8 174 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 BTNL8Q6UX41 500 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 DPPA3Q6W0C5 159 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 IL34Q6ZMJ4 242 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 Q6ZRG5 221 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 ZNF114Q8NC26 417 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 NPBQ8NG41 125 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 TAF15Q92804 592 aaKnown RBP eCLIP4.51□□□□□ -1.69
CHKA-208ENST00000533910 C20orf24Q9BUV8 137 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 WDR83OSQ9Y284 106 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 PLXNB1O43157 2135 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 CREBBPQ92793 2442 aa4.51□□□□□ -1.69
CHKA-208ENST00000533910 PRRC2AP48634 2157 aaKnown RBP4.5□□□□□ -1.69
CHKA-208ENST00000533910 A0A087X0K7 114 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 CENPVL3A0A0U1RRI6 287 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 IGLC7A0M8Q6 106 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 SMCO3A2RU48 225 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 B4DSR2 109 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 E7EUB6 86 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 NPFFO15130 113 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 NBR2O15453 112 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 SOX15O60248 233 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 MPDU1O75352 247 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 CA2P00918 260 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 IGKV1D-33P01593 117 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 IGKV1-33P01594 117 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 SAA4P35542 130 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 RPL27AP46776 148 aaKnown RBP4.5□□□□□ -1.69
CHKA-208ENST00000533910 SERF2P84101 59 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 LOXL1Q08397 574 aaPredicted RBP4.5□□□□□ -1.69
CHKA-208ENST00000533910 PJVKQ0ZLH3 352 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 DEFB113Q30KQ7 82 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 LBHQ53QV2 105 aaPredicted RBP4.5□□□□□ -1.69
CHKA-208ENST00000533910 UQCC3Q6UW78 93 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 IL17RELQ6ZVW7 336 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 ERASQ7Z444 233 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 PPP1R27Q86WC6 154 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 OR2T10Q8NGZ9 312 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 SCGB1C1Q8TD33 95 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 MALSU1Q96EH3 234 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 RSG1Q9BU20 258 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 NPCDR1Q9BY65 106 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 METTL1Q9UBP6 276 aaKnown RBP4.5□□□□□ -1.69
CHKA-208ENST00000533910 HILPDAQ9Y5L2 63 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 RFNGQ9Y644 331 aa4.5□□□□□ -1.69
CHKA-208ENST00000533910 GCN1Q92616 2671 aaKnown RBP4.49□□□□□ -1.69
CHKA-208ENST00000533910 UNC79Q9P2D8 2635 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 TRAV1-1A0A0B4J248 108 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 IGHV1-69DA0A0B4J2H0 117 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 A0A1W2PRD5 423 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 A0A1W2PRF3 423 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 A0A1W2PRM7 423 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 TEX46H3BTG2 121 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 IGHV1-69P01742 117 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 IFNA4P05014 189 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 ZP3P21754 424 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 FGF7P21781 194 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 CDX1P47902 265 aaPredicted RBP4.49□□□□□ -1.69
CHKA-208ENST00000533910 ERHP84090 104 aaKnown RBP4.49□□□□□ -1.69
CHKA-208ENST00000533910 MMDQ15546 238 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 C5orf47Q569G3 176 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 AKR1C8PQ5T2L2 129 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 LFNGQ8NES3 379 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 OR10W1Q8NGF6 305 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 FAM213BQ8TBF2 198 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 RNASEH2CQ8TDP1 164 aaKnown RBP4.49□□□□□ -1.69
CHKA-208ENST00000533910 SRSF12Q8WXF0 261 aaKnown RBP4.49□□□□□ -1.69
CHKA-208ENST00000533910 MARC2Q969Z3 335 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 P2RX4Q99571 388 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 FBXL15Q9H469 300 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 KCNIP2Q9NS61 270 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 PAM16Q9Y3D7 125 aa4.49□□□□□ -1.69
CHKA-208ENST00000533910 TRAV40A0A0B4J280 105 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 A0A1W2PPQ1 181 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 TMEM89A2RUT3 159 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 KRBOX1C9JBD0 128 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 C17orf112F2Z3M2 114 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 I3L521 148 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 J3QLI3 93 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 FCN1O00602 326 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 PRH1P02810 166 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 FAM106CPP0CH98 169 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 OR13C7P0DN81 318 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms