RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 NUP210LQ5VU65 1888 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 SYNE1Q8NF91 8797 aaKnown RBP0.07□□□□□ -2.4
ATM-220ENST00000533526 A0A0D9SG42 100 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 TCRBV4S1A1TA0A5B7 111 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 TTRP02766 147 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 IFNA16P05015 189 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 SERPINA6P08185 405 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 NKX2-5P52952 324 aaPredicted RBP0.07□□□□□ -2.4
ATM-220ENST00000533526 RHOBP62745 196 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 KRTAP26-1Q6PEX3 210 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 GDPD1Q8N9F7 314 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 TP53RKQ96S44 253 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 GPER1Q99527 375 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 BCL2L10Q9HD36 194 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 C14orf105Q9NVL8 296 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 UTP11Q9Y3A2 253 aaKnown RBP0.07□□□□□ -2.4
ATM-220ENST00000533526 DOCK3Q8IZD9 2030 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 ALPK3Q96L96 1907 aa0.07□□□□□ -2.4
ATM-220ENST00000533526 ROBO3Q96MS0 1386 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 ASCC3Q8N3C0 2202 aaKnown RBP0.06□□□□□ -2.4
ATM-220ENST00000533526 SMIM23A6NLE4 172 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 K7EIL1 84 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 SPINK7P58062 85 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 COTL1Q14019 142 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 CDKL4Q5MAI5 379 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 Q6ZS92 163 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 OR10AC1Q8NH08 325 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 FAM172AQ8WUF8 416 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 BORCS7Q96B45 105 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 ADAT3Q96EY9 351 aaPredicted RBP0.06□□□□□ -2.4
ATM-220ENST00000533526 LINC00052Q96N35 136 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 SYNE2Q8WXH0 6885 aaKnown RBP0.06□□□□□ -2.4
ATM-220ENST00000533526 KIAA1549Q9HCM3 1950 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 CITO14578 2027 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 FANCMQ8IYD8 2048 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 ZNF462Q96JM2 2506 aa0.06□□□□□ -2.4
ATM-220ENST00000533526 CACNA1EQ15878 2313 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 SCN10AQ9Y5Y9 1956 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 ANK2Q01484 3957 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 CYB5BO43169 146 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 KLF7O75840 302 aaPredicted RBP0.05□□□□□ -2.4
ATM-220ENST00000533526 GADD45GO95257 159 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 AHSA1O95433 338 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 KRTAP2-3P0C7H8 128 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 PPIBP23284 216 aaKnown RBP0.05□□□□□ -2.4
ATM-220ENST00000533526 DEFA1P59665 94 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 IAH1Q2TAA2 248 aaPredicted RBP0.05□□□□□ -2.4
ATM-220ENST00000533526 C12orf74Q32Q52 190 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 GRINAQ7Z429 371 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 SLC30A7Q8NEW0 376 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 OR2T35Q8NGX2 323 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 WFDC5Q8TCV5 224 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 TSKUQ8WUA8 353 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 CT55Q8WUE5 264 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 CANT1Q8WVQ1 401 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 PSMF1Q92530 271 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 SLAMF6Q96DU3 332 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 C8orf76Q96K31 380 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 KRTAP2-4Q9BYR9 128 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 KRTAP2-1Q9BYU5 128 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 TAS2R7Q9NYW3 318 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 UBAP1Q9NZ09 502 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 RIMBP3CA6NJZ7 1639 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 RIMBP3BA6NNM3 1639 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 RIMBP3Q9UFD9 1639 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 RTL1A6NKG5 1358 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 MYH3P11055 1940 aa0.05□□□□□ -2.4
ATM-220ENST00000533526 N4BP2Q86UW6 1770 aaPredicted RBP0.04□□□□□ -2.4
ATM-220ENST00000533526 FAM236DA0A1B0GTK5 79 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 CLDN24A6NM45 220 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 C1orf196B1AJZ1 125 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 TIMM17BO60830 172 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 SERPINE1P05121 402 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 FAM236CP0DP71 79 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 HOXA6P31267 233 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 FOXA3P55318 350 aaPredicted RBP0.04□□□□□ -2.4
ATM-220ENST00000533526 DYNLT1P63172 113 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 EIF5AP63241 154 aaKnown RBP0.04□□□□□ -2.4
ATM-220ENST00000533526 C4orf22Q6V702 233 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 ZNF833PQ6ZTB9 187 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 CLDN22Q8N7P3 220 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 ZNF431Q8TF32 576 aaPredicted RBP0.04□□□□□ -2.4
ATM-220ENST00000533526 LYSMD1Q96S90 227 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 PRADC1Q9BSG0 188 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 MED29Q9NX70 200 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 TVP23BQ9NYZ1 205 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 IDI2-AS1Q9NZ38 188 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 NAV2Q8IVL1 2488 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 NCOA1Q15788 1441 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 HMCN2Q8NDA2 5059 aa0.04□□□□□ -2.4
ATM-220ENST00000533526 LRP1Q07954 4544 aaKnown RBP0.03□□□□□ -2.4
ATM-220ENST00000533526 SCN8AQ9UQD0 1980 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 hCG_1818297A0A087WSY0 165 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 TRGV10A0A0A0MS01 117 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 hADV38S2A0JD32 116 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 A8MT66 165 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 H3BRM9 83 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 M0R378 163 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 CNIH1O95406 144 aa0.03□□□□□ -2.4
ATM-220ENST00000533526 C8GP07360 202 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms