RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 SCRT1Q9BWW7 348 aa14.6□□□□□ -0.07
PAX6-228ENST00000533333 CARHSP1Q9Y2V2 147 aaKnown RBP14.6□□□□□ -0.07
PAX6-228ENST00000533333 ZNF138P52744 262 aa14.6□□□□□ -0.07
PAX6-228ENST00000533333 TNFRSF14Q92956 283 aa14.6□□□□□ -0.07
PAX6-228ENST00000533333 ZNF318Q5VUA4 2279 aa14.6□□□□□ -0.07
PAX6-228ENST00000533333 IGHV1-46P01743 117 aa14.6□□□□□ -0.07
PAX6-228ENST00000533333 CFHR3Q02985 330 aa14.6□□□□□ -0.07
PAX6-228ENST00000533333 LYZL1Q6UWQ5 148 aa14.6□□□□□ -0.07
PAX6-228ENST00000533333 BCL6BQ8N143 479 aaPredicted RBP14.6□□□□□ -0.07
PAX6-228ENST00000533333 GSN-AS1Q9NRJ2 163 aa14.6□□□□□ -0.07
PAX6-228ENST00000533333 TRBV7-1A0A0A6YYK4 115 aa14.59□□□□□ -0.07
PAX6-228ENST00000533333 ZNF329Q86UD4 541 aa14.59□□□□□ -0.07
PAX6-228ENST00000533333 THAP8Q8NA92 274 aa14.59□□□□□ -0.07
PAX6-228ENST00000533333 GATA4P43694 442 aa14.59□□□□□ -0.07
PAX6-228ENST00000533333 MDC1Q14676 2089 aaKnown RBP14.59□□□□□ -0.07
PAX6-228ENST00000533333 C20orf204Q6ZNR8 217 aa14.59□□□□□ -0.07
PAX6-228ENST00000533333 C14orf178Q8N769 122 aaPredicted RBP14.59□□□□□ -0.07
PAX6-228ENST00000533333 A0A087WWL8 130 aa14.59□□□□□ -0.07
PAX6-228ENST00000533333 IGKV1D-13A0A0B4J2D9 117 aa14.58□□□□□ -0.07
PAX6-228ENST00000533333 IGKV1-13P0DP09 117 aa14.58□□□□□ -0.07
PAX6-228ENST00000533333 LINC01559Q495D7 138 aa14.58□□□□□ -0.07
PAX6-228ENST00000533333 TPTE2P1Q5T6R2 138 aa14.58□□□□□ -0.07
PAX6-228ENST00000533333 TBX6O95947 436 aaPredicted RBP14.58□□□□□ -0.08
PAX6-228ENST00000533333 WBP1Q96G27 269 aa14.58□□□□□ -0.08
PAX6-228ENST00000533333 C9orf139Q6ZV77 190 aa14.58□□□□□ -0.08
PAX6-228ENST00000533333 LINC00477Q96M19 166 aa14.58□□□□□ -0.08
PAX6-228ENST00000533333 PMVKQ15126 192 aa14.57□□□□□ -0.08
PAX6-228ENST00000533333 FAM90A2PQ658T7 463 aa14.57□□□□□ -0.08
PAX6-228ENST00000533333 MMP23AO75900 390 aa14.57□□□□□ -0.08
PAX6-228ENST00000533333 ITGB4P16144 1822 aa14.57□□□□□ -0.08
PAX6-228ENST00000533333 MRPS18CQ9Y3D5 142 aaKnown RBP14.57□□□□□ -0.08
PAX6-228ENST00000533333 SH2D1AO60880 128 aa14.57□□□□□ -0.08
PAX6-228ENST00000533333 TCTEX1D4Q5JR98 221 aa14.57□□□□□ -0.08
PAX6-228ENST00000533333 MSRB2Q9Y3D2 182 aa14.57□□□□□ -0.08
PAX6-228ENST00000533333 LINC00271P0C7V0 271 aa14.56□□□□□ -0.08
PAX6-228ENST00000533333 C22orf46C9J442 243 aa14.56□□□□□ -0.08
PAX6-228ENST00000533333 SOCS3O14543 225 aa14.56□□□□□ -0.08
PAX6-228ENST00000533333 DUTP33316 252 aaKnown RBP14.56□□□□□ -0.08
PAX6-228ENST00000533333 C10orf55Q5SWW7 151 aa14.56□□□□□ -0.08
PAX6-228ENST00000533333 LY6G5BQ8NDX9 201 aa14.56□□□□□ -0.08
PAX6-228ENST00000533333 IGHV1-3A0A0C4DH29 117 aa14.56□□□□□ -0.08
PAX6-228ENST00000533333 TNFSF13O75888 250 aa14.56□□□□□ -0.08
PAX6-228ENST00000533333 MINOS1Q5TGZ0 78 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 MINOS1-NBL1R4GNA1 71 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 PSPNO60542 156 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 SLC25A48Q6ZT89 311 aaKnown RBP14.55□□□□□ -0.08
PAX6-228ENST00000533333 Q8TAT8 98 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 SPRR3Q9UBC9 169 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 CLPSL1A2RUU4 121 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 E9PQ18 207 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 GAGE12JA6NER3 117 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 GAGE1Q13065 139 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 GAGE4Q13068 117 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 GAGE5Q13069 117 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 TAL2Q16559 108 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 TAF1P21675 1872 aa14.55□□□□□ -0.08
PAX6-228ENST00000533333 KLF5Q13887 457 aaPredicted RBP14.54□□□□□ -0.08
PAX6-228ENST00000533333 TMEM200BQ69YZ2 307 aa14.54□□□□□ -0.08
PAX6-228ENST00000533333 IGFL4Q6B9Z1 124 aa14.54□□□□□ -0.08
PAX6-228ENST00000533333 GUSBP1Q15486 140 aa14.54□□□□□ -0.08
PAX6-228ENST00000533333 LINC01356Q8N9X3 169 aa14.54□□□□□ -0.08
PAX6-228ENST00000533333 USMG5Q96IX5 58 aa14.54□□□□□ -0.08
PAX6-228ENST00000533333 NUP214P35658 2090 aaPredicted RBP14.54□□□□□ -0.08
PAX6-228ENST00000533333 PFN2P35080 140 aa14.54□□□□□ -0.08
PAX6-228ENST00000533333 KLF17Q5JT82 389 aaPredicted RBP14.54□□□□□ -0.08
PAX6-228ENST00000533333 IGHV1-8P0DP01 117 aa14.54□□□□□ -0.08
PAX6-228ENST00000533333 CFHR1Q03591 330 aa14.54□□□□□ -0.08
PAX6-228ENST00000533333 RMI2Q96E14 147 aa14.54□□□□□ -0.08
PAX6-228ENST00000533333 WISP3O95389 354 aaPredicted RBP14.54□□□□□ -0.08
PAX6-228ENST00000533333 CSRP1P21291 193 aaKnown RBP14.54□□□□□ -0.08
PAX6-228ENST00000533333 ZNF319Q9P2F9 582 aa14.54□□□□□ -0.08
PAX6-228ENST00000533333 SCN9AQ15858 1988 aa14.53□□□□□ -0.08
PAX6-228ENST00000533333 LCN12Q6JVE5 192 aa14.53□□□□□ -0.08
PAX6-228ENST00000533333 A0A1B0GWJ7 208 aa14.53□□□□□ -0.08
PAX6-228ENST00000533333 SCN1AP35498 2009 aa14.53□□□□□ -0.08
PAX6-228ENST00000533333 FAM90A9PA6NNJ1 464 aa14.53□□□□□ -0.08
PAX6-228ENST00000533333 DEFB131AP59861 70 aa14.53□□□□□ -0.08
PAX6-228ENST00000533333 RHPN1-AS1Q9BWJ2 59 aa14.53□□□□□ -0.08
PAX6-228ENST00000533333 SYNJ2BPP57105 145 aa14.53□□□□□ -0.08
PAX6-228ENST00000533333 FAM110DQ8TAY7 271 aaPredicted RBP14.53□□□□□ -0.08
PAX6-228ENST00000533333 ARAP2Q8WZ64 1704 aa14.53□□□□□ -0.08
PAX6-228ENST00000533333 IGHG3P01860 377 aa14.53□□□□□ -0.08
PAX6-228ENST00000533333 FAM223BA6NKX1 122 aa14.52□□□□□ -0.08
PAX6-228ENST00000533333 FAM223AQ8IWN6 122 aa14.52□□□□□ -0.08
PAX6-228ENST00000533333 TMEM158Q8WZ71 300 aa14.52□□□□□ -0.08
PAX6-228ENST00000533333 INAFM2P0DMQ5 153 aa14.52□□□□□ -0.09
PAX6-228ENST00000533333 HAMPP81172 84 aa14.52□□□□□ -0.09
PAX6-228ENST00000533333 NDUFAF3Q9BU61 184 aa14.52□□□□□ -0.09
PAX6-228ENST00000533333 C9JAW5 83 aa14.52□□□□□ -0.09
PAX6-228ENST00000533333 TMEM105Q8N8V8 129 aa14.52□□□□□ -0.09
PAX6-228ENST00000533333 TUBGCP6Q96RT7 1819 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 hADV29S1A0JD25 119 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 A6NNC1 897 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 IGFBP3P17936 291 aaPredicted RBP14.51□□□□□ -0.09
PAX6-228ENST00000533333 TIMP3P35625 211 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 XCL2Q9UBD3 114 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 SPATA31B1PQ5VZV4 182 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 SMCHD1A6NHR9 2005 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 TRBV25-1A0A075B6N4 114 aa14.51□□□□□ -0.09
PAX6-228ENST00000533333 RP1P56715 2156 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms