RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 GLMPQ8WWB7 406 aa22.31■■□□□ 1.16
SSSCA1-207ENST00000533115 TENM2Q9NT68 2774 aa22.31■■□□□ 1.16
SSSCA1-207ENST00000533115 IGKV1D-37A0A075B6S9 117 aa22.3■■□□□ 1.16
SSSCA1-207ENST00000533115 ZFP92A6NM28 416 aa22.3■■□□□ 1.16
SSSCA1-207ENST00000533115 WRBO00258 174 aa22.3■■□□□ 1.16
SSSCA1-207ENST00000533115 ANXA7P20073 488 aaKnown RBP22.3■■□□□ 1.16
SSSCA1-207ENST00000533115 C4orf46Q504U0 113 aa22.3■■□□□ 1.16
SSSCA1-207ENST00000533115 LEMD1Q68G75 181 aa22.3■■□□□ 1.16
SSSCA1-207ENST00000533115 OR51G1Q8NGK1 321 aa22.3■■□□□ 1.16
SSSCA1-207ENST00000533115 LYSTQ99698 3801 aa22.29■■□□□ 1.16
SSSCA1-207ENST00000533115 AP2S1P53680 142 aaPredicted RBP22.29■■□□□ 1.16
SSSCA1-207ENST00000533115 CNPY1Q3B7I2 92 aa22.29■■□□□ 1.16
SSSCA1-207ENST00000533115 DCANP1Q8TF63 244 aa22.29■■□□□ 1.16
SSSCA1-207ENST00000533115 RNF125Q96EQ8 232 aa22.29■■□□□ 1.16
SSSCA1-207ENST00000533115 MPTX1A8MV57 137 aa22.28■■□□□ 1.16
SSSCA1-207ENST00000533115 PLA2G10O15496 165 aa22.28■■□□□ 1.16
SSSCA1-207ENST00000533115 ZNF90Q03938 601 aa22.28■■□□□ 1.16
SSSCA1-207ENST00000533115 BUB3O43684 328 aa22.27■■□□□ 1.16
SSSCA1-207ENST00000533115 IFNA21P01568 189 aa22.27■■□□□ 1.16
SSSCA1-207ENST00000533115 ID3Q02535 119 aa22.27■■□□□ 1.16
SSSCA1-207ENST00000533115 FABP1P07148 127 aa22.26■■□□□ 1.15
SSSCA1-207ENST00000533115 PBDC1Q9BVG4 233 aa22.26■■□□□ 1.15
SSSCA1-207ENST00000533115 A0A0J9YWU9 116 aa22.25■■□□□ 1.15
SSSCA1-207ENST00000533115 PRSS46E5RG02 174 aa22.25■■□□□ 1.15
SSSCA1-207ENST00000533115 LYRM1O43325 122 aa22.25■■□□□ 1.15
SSSCA1-207ENST00000533115 ZNF688P0C7X2 276 aa22.25■■□□□ 1.15
SSSCA1-207ENST00000533115 SPANXN5Q5MJ07 72 aa22.25■■□□□ 1.15
SSSCA1-207ENST00000533115 TRGV9Q99603 122 aa22.25■■□□□ 1.15
SSSCA1-207ENST00000533115 OR8G2PQ6IF36 304 aa22.24■■□□□ 1.15
SSSCA1-207ENST00000533115 STHQ8IWL8 128 aa22.24■■□□□ 1.15
SSSCA1-207ENST00000533115 THAP8Q8NA92 274 aa22.24■■□□□ 1.15
SSSCA1-207ENST00000533115 OR4D5Q8NGN0 318 aa22.24■■□□□ 1.15
SSSCA1-207ENST00000533115 STRAPQ9Y3F4 350 aaKnown RBP22.24■■□□□ 1.15
SSSCA1-207ENST00000533115 SACSQ9NZJ4 4579 aa22.24■■□□□ 1.15
SSSCA1-207ENST00000533115 RYR2Q92736 4967 aa22.24■■□□□ 1.15
SSSCA1-207ENST00000533115 H3BP45 60 aa22.23■■□□□ 1.15
SSSCA1-207ENST00000533115 NUP62P37198 522 aaPredicted RBP22.23■■□□□ 1.15
SSSCA1-207ENST00000533115 NKX2-1P43699 371 aaPredicted RBP22.23■■□□□ 1.15
SSSCA1-207ENST00000533115 POLR2GP62487 172 aaKnown RBP eCLIP22.23■■□□□ 1.15
SSSCA1-207ENST00000533115 SIGLEC15Q6ZMC9 328 aa22.23■■□□□ 1.15
SSSCA1-207ENST00000533115 GATAD1Q8WUU5 269 aa22.23■■□□□ 1.15
SSSCA1-207ENST00000533115 C20orf85Q9H1P6 137 aa22.23■■□□□ 1.15
SSSCA1-207ENST00000533115 PFDN2Q9UHV9 154 aa22.23■■□□□ 1.15
SSSCA1-207ENST00000533115 IGKV1OR2-108A0A075B7D4 117 aa22.22■■□□□ 1.15
SSSCA1-207ENST00000533115 LCE6AA0A183 80 aa22.22■■□□□ 1.15
SSSCA1-207ENST00000533115 SNRPGP15A8MWD9 76 aa22.22■■□□□ 1.15
SSSCA1-207ENST00000533115 MITD1Q8WV92 249 aa22.22■■□□□ 1.15
SSSCA1-207ENST00000533115 CA1P00915 261 aaPredicted RBP22.21■■□□□ 1.15
SSSCA1-207ENST00000533115 LYZP61626 148 aa22.21■■□□□ 1.15
SSSCA1-207ENST00000533115 OR2F1Q13607 317 aa22.21■■□□□ 1.15
SSSCA1-207ENST00000533115 CCDC32Q9BV29 185 aa22.21■■□□□ 1.15
SSSCA1-207ENST00000533115 NRN1Q9NPD7 142 aa22.21■■□□□ 1.15
SSSCA1-207ENST00000533115 LINC00299Q6ZSB3 139 aa22.2■■□□□ 1.14
SSSCA1-207ENST00000533115 PSENENQ9NZ42 101 aa22.2■■□□□ 1.14
SSSCA1-207ENST00000533115 TCRBP04435 133 aa22.19■■□□□ 1.14
SSSCA1-207ENST00000533115 EWSR1Q01844 656 aaKnown RBP eCLIP22.19■■□□□ 1.14
SSSCA1-207ENST00000533115 TRPT1Q86TN4 253 aaKnown RBP22.19■■□□□ 1.14
SSSCA1-207ENST00000533115 KNCNA6PVL3 124 aa22.18■■□□□ 1.14
SSSCA1-207ENST00000533115 SSSCA1O60232 199 aa22.18■■□□□ 1.14
SSSCA1-207ENST00000533115 IAH1Q2TAA2 248 aaPredicted RBP22.18■■□□□ 1.14
SSSCA1-207ENST00000533115 PSMG4Q5JS54 123 aa22.18■■□□□ 1.14
SSSCA1-207ENST00000533115 RARRES2Q99969 163 aa22.18■■□□□ 1.14
SSSCA1-207ENST00000533115 SEPSECSQ9HD40 501 aaKnown RBP22.18■■□□□ 1.14
SSSCA1-207ENST00000533115 SNRPD3P62318 126 aaKnown RBP22.17■■□□□ 1.14
SSSCA1-207ENST00000533115 SMIM8Q96KF7 97 aa22.17■■□□□ 1.14
SSSCA1-207ENST00000533115 CFDP00746 253 aaPredicted RBP22.16■■□□□ 1.14
SSSCA1-207ENST00000533115 ATF4P18848 351 aaPredicted RBP22.16■■□□□ 1.14
SSSCA1-207ENST00000533115 ACTL10Q5JWF8 245 aa22.16■■□□□ 1.14
SSSCA1-207ENST00000533115 ACOT7LQ6ZUV0 252 aa22.16■■□□□ 1.14
SSSCA1-207ENST00000533115 TMEM217Q8N7C4 229 aa22.16■■□□□ 1.14
SSSCA1-207ENST00000533115 ZBTB8BQ8NAP8 495 aaPredicted RBP22.16■■□□□ 1.14
SSSCA1-207ENST00000533115 AGRNO00468 2067 aa22.16■■□□□ 1.14
SSSCA1-207ENST00000533115 TRAV6A0A075B6T7 132 aa22.15■■□□□ 1.14
SSSCA1-207ENST00000533115 SCGB1D2O95969 90 aa22.15■■□□□ 1.14
SSSCA1-207ENST00000533115 AKR1C1Q04828 323 aa22.15■■□□□ 1.14
SSSCA1-207ENST00000533115 C1orf194Q5T5A4 169 aa22.15■■□□□ 1.14
SSSCA1-207ENST00000533115 OR11H2Q8NH07 326 aa22.15■■□□□ 1.14
SSSCA1-207ENST00000533115 RAB40CQ96S21 281 aa22.15■■□□□ 1.14
SSSCA1-207ENST00000533115 GSKIPQ9P0R6 139 aa22.15■■□□□ 1.14
SSSCA1-207ENST00000533115 FBXL17Q9UF56 701 aa22.15■■□□□ 1.14
SSSCA1-207ENST00000533115 SPP1P10451 314 aa22.14■■□□□ 1.13
SSSCA1-207ENST00000533115 PAX9P55771 341 aa22.14■■□□□ 1.13
SSSCA1-207ENST00000533115 MORN3Q6PF18 240 aaPredicted RBP22.14■■□□□ 1.13
SSSCA1-207ENST00000533115 S100ZQ8WXG8 99 aa22.14■■□□□ 1.13
SSSCA1-207ENST00000533115 PPP1R14BQ96C90 147 aa22.14■■□□□ 1.13
SSSCA1-207ENST00000533115 NUDT15Q9NV35 164 aa22.14■■□□□ 1.13
SSSCA1-207ENST00000533115 PMS2P5A8MQ11 134 aa22.13■■□□□ 1.13
SSSCA1-207ENST00000533115 CXorf65A6NEN9 183 aa22.12■■□□□ 1.13
SSSCA1-207ENST00000533115 GIG44P09565 113 aaPredicted RBP22.12■■□□□ 1.13
SSSCA1-207ENST00000533115 PMS2P11Q13670 270 aa22.12■■□□□ 1.13
SSSCA1-207ENST00000533115 TMEM41BQ5BJD5 291 aa22.12■■□□□ 1.13
SSSCA1-207ENST00000533115 TMEM144Q7Z5S9 345 aa22.12■■□□□ 1.13
SSSCA1-207ENST00000533115 BPIFCQ8NFQ6 507 aa22.12■■□□□ 1.13
SSSCA1-207ENST00000533115 SMCO3A2RU48 225 aa22.11■■□□□ 1.13
SSSCA1-207ENST00000533115 GATA2P23769 480 aaPredicted RBP22.11■■□□□ 1.13
SSSCA1-207ENST00000533115 TMEM14EPQ6UXP3 125 aa22.11■■□□□ 1.13
SSSCA1-207ENST00000533115 SLC45A2Q9UMX9 530 aa22.11■■□□□ 1.13
SSSCA1-207ENST00000533115 A6NHS1 94 aa22.1■■□□□ 1.13
SSSCA1-207ENST00000533115 TAS2R30P59541 319 aa22.1■■□□□ 1.13
SSSCA1-207ENST00000533115 TMEM182Q6ZP80 229 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms