RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 SSBP2P81877 361 aaPredicted RBP8.84□□□□□ -0.99
COLCA1-203ENST00000532918 CR1LQ2VPA4 569 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 GAGE13Q4V321 117 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 NHP2Q9NX24 153 aaKnown RBP8.84□□□□□ -0.99
COLCA1-203ENST00000532918 PGPEP1LA6NFU8 196 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 CGAP01215 116 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 CBLN1P23435 193 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 PAX2Q02962 417 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 EDA2RQ9HAV5 297 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 PTPRFP10586 1907 aa8.84□□□□□ -0.99
COLCA1-203ENST00000532918 LY6G6EA0A0G2JKS1 128 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 U3KQA8 63 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 CACNA1GO43497 2377 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 DLEU1O43261 78 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 RP1P56715 2156 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 A0A1B0GUT8 65 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 MLNRO43193 412 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 CD8AP01732 235 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 TFF3Q07654 80 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 CD177Q8N6Q3 437 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 RTBDNQ9BSG5 229 aaPredicted RBP8.83□□□□□ -1
COLCA1-203ENST00000532918 CKAP5Q14008 2032 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 RPP21Q9H633 154 aaKnown RBP8.83□□□□□ -1
COLCA1-203ENST00000532918 MGAMO43451 1857 aa8.83□□□□□ -1
COLCA1-203ENST00000532918 CNOT1A5YKK6 2376 aaKnown RBP8.82□□□□□ -1
COLCA1-203ENST00000532918 SRSF8Q9BRL6 282 aaKnown RBP8.82□□□□□ -1
COLCA1-203ENST00000532918 IGHV4-39P01824 125 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 SAA4P35542 130 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 TNFSF13O75888 250 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 TFF1P04155 84 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 ORAOV1Q8WV07 137 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 CARHSP1Q9Y2V2 147 aaKnown RBP8.82□□□□□ -1
COLCA1-203ENST00000532918 PIKFYVEQ9Y2I7 2098 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 TRAV12-3A0A0B4J271 114 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 IGHV1-69DA0A0B4J2H0 117 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 IGHV1-69P01742 117 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 LCN12Q6JVE5 192 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 GLMPQ8WWB7 406 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 RCC1LQ96I51 464 aaKnown RBP8.82□□□□□ -1
COLCA1-203ENST00000532918 GTSF1LQ9H1H1 148 aa8.82□□□□□ -1
COLCA1-203ENST00000532918 INTS1Q8N201 2190 aaKnown RBP8.82□□□□□ -1
COLCA1-203ENST00000532918 SEC11AP67812 179 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 IFITM3Q01628 133 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 EFNB3Q15768 340 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 OR10J3Q5JRS4 329 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 C9orf139Q6ZV77 190 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 MIR17HGQ75NE6 70 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 SPTBP11277 2137 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 C18orf12Q96KH6 178 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 C18orf15Q96N68 181 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 DPH3P1Q9H4G8 78 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 ST20Q9HBF5 79 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 CACNA1BQ00975 2339 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 ZNF479Q96JC4 524 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 ZNF319Q9P2F9 582 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 KLF2Q9Y5W3 355 aaPredicted RBP8.81□□□□□ -1
COLCA1-203ENST00000532918 DOCK4Q8N1I0 1966 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 IGKV1D-13A0A0B4J2D9 117 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 A0A1B0GWJ7 208 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 HOXA3O43365 443 aaPredicted RBP8.81□□□□□ -1
COLCA1-203ENST00000532918 IGKV1-13P0DP09 117 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 CNTFRP26992 372 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 FOXA3P55318 350 aaPredicted RBP8.81□□□□□ -1
COLCA1-203ENST00000532918 OCIAD2Q56VL3 154 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 MUC21Q5SSG8 566 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 FOXL2NBQ6ZUU3 175 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 Q8TCH9 128 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 C1orf43Q9BWL3 253 aa8.81□□□□□ -1
COLCA1-203ENST00000532918 GREB1Q4ZG55 1949 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 ZNF688P0C7X2 276 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 EGR1P18146 543 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 REG4Q9BYZ8 158 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 PSCAO43653 123 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 INSP01308 110 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 KIR3DL3Q8N743 410 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 MRAPQ8TCY5 172 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 SCGB3A1Q96QR1 104 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 FNDC1Q4ZHG4 1894 aaPredicted RBP8.8□□□□□ -1
COLCA1-203ENST00000532918 TRAV8-1A0A0A6YYK1 113 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 IGHV2-70DA0A0C4DH43 119 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 PSPNO60542 156 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 ESDP10768 282 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 SELLP14151 372 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 ATXN8Q156A1 80 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 SAMD5Q5TGI4 173 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 A0A087WX48 190 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 H0YJW9 148 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 SLC25A20O43772 301 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 APOHP02749 345 aaPredicted RBP8.8□□□□□ -1
COLCA1-203ENST00000532918 AMBPP02760 352 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 H2BFSP57053 126 aa8.8□□□□□ -1
COLCA1-203ENST00000532918 TRAV9-2A0A087WT02 112 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 HIST1H4AP62805 103 aaKnown RBP8.79□□□□□ -1
COLCA1-203ENST00000532918 ZNF362Q5T0B9 420 aaPredicted RBP8.79□□□□□ -1
COLCA1-203ENST00000532918 SFTA2Q6UW10 78 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 TRBV6-6A0A0A6YYG2 114 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 LINC01549A6NIU2 74 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 LINC01619G3V211 115 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 RAMP3O60896 148 aa8.79□□□□□ -1
COLCA1-203ENST00000532918 IFI27P40305 119 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms