RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 ZNF688P0C7X2 276 aa12.69□□□□□ -0.38
PPFIA1-222ENST00000532504 HOXB4P17483 251 aaPredicted RBP12.69□□□□□ -0.38
PPFIA1-222ENST00000532504 SIGLEC15Q6ZMC9 328 aa12.69□□□□□ -0.38
PPFIA1-222ENST00000532504 PEF1Q9UBV8 284 aaKnown RBP12.69□□□□□ -0.38
PPFIA1-222ENST00000532504 ZNF253O75346 499 aa12.69□□□□□ -0.38
PPFIA1-222ENST00000532504 NMSQ5H8A3 153 aa12.69□□□□□ -0.38
PPFIA1-222ENST00000532504 SAPCD1Q5SSQ6 148 aa12.69□□□□□ -0.38
PPFIA1-222ENST00000532504 SEC11CQ9BY50 192 aa12.69□□□□□ -0.38
PPFIA1-222ENST00000532504 TRAV5A0A0B4J249 113 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 MEOX2P50222 304 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 TNRC6AQ8NDV7 1962 aaKnown RBP12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 A0A1W2PPI3 338 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 ISLRO14498 428 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 AMTP48728 403 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 DTX2Q86UW9 622 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 TRBV7-1A0A0A6YYK4 115 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 GNG5P63218 68 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 ZNF56Q15929 161 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 BIVMQ86UB2 503 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 M0R381 172 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 MDKP21741 143 aaPredicted RBP12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 CENPWQ5EE01 88 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 TREML4Q6UXN2 200 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 Q6ZRM9 215 aa12.68□□□□□ -0.38
PPFIA1-222ENST00000532504 E9PQ18 207 aa12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 ITGB1BP1O14713 200 aa12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 PRSS1P07477 247 aa12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 FAM3BP58499 235 aaPredicted RBP12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 CBLN2Q8IUK8 224 aa12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 OR5AL1P0C617 328 aa12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 RPL35AP18077 110 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 SPSB3Q6PJ21 355 aa12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 ZNF833PQ6ZTB9 187 aa12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 FASNP49327 2511 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 PARLQ9H300 379 aa12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 TPSG1Q9NRR2 321 aa12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 RPL29P47914 159 aaKnown RBP12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 ATP5G3P48201 142 aa12.67□□□□□ -0.38
PPFIA1-222ENST00000532504 ARFGEF3Q5TH69 2177 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 TRGV2A0A075B6R0 118 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 HIST1H2BAQ96A08 127 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 B4DEV8 164 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 LHBP01229 141 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 NCOR1P1Q9H4R4 102 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 PEX7O00628 323 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 TMEM18Q96B42 140 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 GPR82Q96P67 336 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 SCRT1Q9BWW7 348 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 WDR83OSQ9Y284 106 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 RNF212Q495C1 297 aa12.66□□□□□ -0.38
PPFIA1-222ENST00000532504 GRIFINA4D1Z8 144 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 FAM223BA6NKX1 122 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 GCGP01275 180 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 CRISP2P16562 243 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 AMMECR1LQ6DCA0 310 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 FAM223AQ8IWN6 122 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 SLC50A1Q9BRV3 221 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 SCO2A0A1W2PP80 73 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 APCSP02743 223 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 KLHDC1Q8N7A1 406 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 OR5AN1Q8NGI8 311 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 NEU1Q99519 415 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 PMS2P5A8MQ11 134 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 TCAPO15273 167 aa12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 ZFP36P26651 326 aaKnown RBP12.65□□□□□ -0.38
PPFIA1-222ENST00000532504 OR1N2Q8NGR9 330 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 RHPN1-AS1Q9BWJ2 59 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 PRDM13Q9H4Q3 707 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 NDUFB8O95169 186 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 GUSBP1Q15486 140 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 TSTD3H0UI37 97 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 UBE2L6O14933 153 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 CKS2P33552 79 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 KRTAP27-1Q3LI81 207 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 C19orf35Q6ZS72 473 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 LINC00311Q8N616 119 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 WFDC11Q8NEX6 87 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 VPREB3Q9UKI3 123 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 FAM74A7A6NL05 159 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 TMEM95Q3KNT9 176 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 SAMD13Q5VXD3 122 aa12.64□□□□□ -0.39
PPFIA1-222ENST00000532504 IGKV3OR2-268A0A0C4DH90 116 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 CENPVL3A0A0U1RRI6 287 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 RNASE2P10153 161 aaKnown RBP12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 FBLN7Q53RD9 439 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 ZNF841Q6ZN19 808 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 RPS20P60866 119 aaKnown RBP12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 WFDC1Q9HC57 220 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 JKAMPQ9P055 326 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 PLA2G2AP14555 144 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 ASIPP42127 132 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 C11orf91Q3C1V1 193 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 ACTL10Q5JWF8 245 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 IGFL4Q6B9Z1 124 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 OR11H1Q8NG94 326 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 SMDT1Q9H4I9 107 aa12.63□□□□□ -0.39
PPFIA1-222ENST00000532504 ZNF705AQ6ZN79 300 aaPredicted RBP12.62□□□□□ -0.39
PPFIA1-222ENST00000532504 RNF166Q96A37 237 aaPredicted RBP12.62□□□□□ -0.39
PPFIA1-222ENST00000532504 GGTLC1Q9BX51 225 aa12.62□□□□□ -0.39
PPFIA1-222ENST00000532504 DUSP14O95147 198 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms