RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 RPH3ALQ9UNE2 315 aa12□□□□□ -0.49
SRPRA-206ENST00000532259 TRAV40A0A0B4J280 105 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 NPFFO15130 113 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 HYPMO75409 117 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 FAM106CPP0CH98 169 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 ZNF562Q6V9R5 426 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 MALSU1Q96EH3 234 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 TXNDC17Q9BRA2 123 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 HELTA6NFD8 242 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 SLC17A3O00476 420 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 PFN1P07737 140 aaKnown RBP11.99□□□□□ -0.49
SRPRA-206ENST00000532259 GNG5P63218 68 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 CENPWQ5EE01 88 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 SFRP2Q96HF1 295 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 TENM4Q6N022 2769 aa11.99□□□□□ -0.49
SRPRA-206ENST00000532259 TRAV34A0A0B4J273 112 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 IGKV1-17P01599 117 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 ECSCRQ19T08 205 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 Q8N9W7 124 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 FXYD5Q96DB9 178 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 SPOCK3Q9BQ16 436 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 NAV2Q8IVL1 2488 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 IGHV7-81A0A0B4J1V7 117 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 MDFIC2A0A1B0GVS7 189 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 LINC01548A6NM66 108 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 OR2J3O76001 311 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 EGR2P11161 476 aaPredicted RBP11.98□□□□□ -0.49
SRPRA-206ENST00000532259 S100PP25815 95 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 NDUFA6P56556 154 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 C1QL4Q86Z23 238 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 BCL6BQ8N143 479 aaPredicted RBP11.98□□□□□ -0.49
SRPRA-206ENST00000532259 FANCD2OSQ96PS1 177 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 PRELID1Q9Y255 219 aa11.98□□□□□ -0.49
SRPRA-206ENST00000532259 TBL2Q9Y4P3 447 aaKnown RBP11.98□□□□□ -0.49
SRPRA-206ENST00000532259 ELOA3CA0A087WX78 387 aaPredicted RBP11.97□□□□□ -0.49
SRPRA-206ENST00000532259 IGHV3-35A0A0C4DH35 117 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 VWC2LB2RUY7 222 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 RD3LP0DJH9 198 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 EBI3Q14213 229 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 RNF2Q99496 336 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 TMUB1Q9BVT8 246 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 KLF2Q9Y5W3 355 aaPredicted RBP11.97□□□□□ -0.49
SRPRA-206ENST00000532259 IGHV3OR16-8A0A075B7F1 116 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 C5orf52A6NGY3 159 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 OOSP1A8MZH6 123 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 GNG4P50150 75 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 PAX8Q06710 450 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 MAPK1IP1LQ8NDC0 245 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 FRZBQ92765 325 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 C11orf52Q96A22 123 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 ANAPC16Q96DE5 110 aa11.97□□□□□ -0.49
SRPRA-206ENST00000532259 IGHV4-38-2P0DP08 117 aa11.96□□□□□ -0.49
SRPRA-206ENST00000532259 MGST1P10620 155 aaKnown RBP11.96□□□□□ -0.49
SRPRA-206ENST00000532259 A0A1W2PRE2 83 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIST1H2BKO60814 126 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 NDUFB8O95169 186 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIST1H2BJP06899 126 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIST1H2BOP23527 126 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 BRS3P32247 399 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIST1H2BBP33778 126 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIST1H2BDP58876 126 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 KRTAP10-9P60411 292 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIST1H2BCP62807 126 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIST2H2BEQ16778 126 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 Q56UQ5 140 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 PDZD11Q5EBL8 140 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.96□□□□□ -0.5
SRPRA-206ENST00000532259 TEX38Q6PEX7 206 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 SGMS2Q8NHU3 365 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIST1H2BHQ93079 126 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIST1H2BNQ99877 126 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIST1H2BMQ99879 126 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 RNASE7Q9H1E1 156 aaKnown RBP11.96□□□□□ -0.5
SRPRA-206ENST00000532259 LINC00527Q9UJ94 153 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 HIGD1AQ9Y241 93 aa11.96□□□□□ -0.5
SRPRA-206ENST00000532259 ZNF469Q96JG9 3925 aaPredicted RBP11.95□□□□□ -0.5
SRPRA-206ENST00000532259 TRBV24-1A0A075B6N3 115 aa11.95□□□□□ -0.5
SRPRA-206ENST00000532259 GNG7O60262 68 aa11.95□□□□□ -0.5
SRPRA-206ENST00000532259 IL4P05112 153 aa11.95□□□□□ -0.5
SRPRA-206ENST00000532259 OR2T8A6NH00 312 aa11.95□□□□□ -0.5
SRPRA-206ENST00000532259 G3V318 75 aa11.95□□□□□ -0.5
SRPRA-206ENST00000532259 ATP6V0E1O15342 81 aa11.95□□□□□ -0.5
SRPRA-206ENST00000532259 TRGC1P0CF51 173 aa11.95□□□□□ -0.5
SRPRA-206ENST00000532259 ERVFC1-1P60608 527 aa11.95□□□□□ -0.5
SRPRA-206ENST00000532259 ZNF329Q86UD4 541 aa11.95□□□□□ -0.5
SRPRA-206ENST00000532259 OR10G8Q8NGN5 311 aa11.95□□□□□ -0.5
SRPRA-206ENST00000532259 APCP25054 2843 aa11.94□□□□□ -0.5
SRPRA-206ENST00000532259 IGLV11-55A0A075B6I3 123 aa11.94□□□□□ -0.5
SRPRA-206ENST00000532259 PPP5D1E7EU14 171 aa11.94□□□□□ -0.5
SRPRA-206ENST00000532259 NDUFS6O75380 124 aaKnown RBP11.94□□□□□ -0.5
SRPRA-206ENST00000532259 SRSF8Q9BRL6 282 aaKnown RBP11.94□□□□□ -0.5
SRPRA-206ENST00000532259 SLC25A39Q9BZJ4 359 aaPredicted RBP11.94□□□□□ -0.5
SRPRA-206ENST00000532259 POLR3KQ9Y2Y1 108 aaPredicted RBP11.94□□□□□ -0.5
SRPRA-206ENST00000532259 PGPA6NDG6 321 aa11.94□□□□□ -0.5
SRPRA-206ENST00000532259 AP4M1O00189 453 aa11.94□□□□□ -0.5
SRPRA-206ENST00000532259 NBEAP1P0C6P0 100 aa11.94□□□□□ -0.5
SRPRA-206ENST00000532259 GFI1BQ5VTD9 330 aa11.94□□□□□ -0.5
SRPRA-206ENST00000532259 UNQ5815/PRO19632Q6UWF5 114 aa11.94□□□□□ -0.5
SRPRA-206ENST00000532259 C7orf69Q9H7B7 122 aa11.94□□□□□ -0.5
SRPRA-206ENST00000532259 AVPP01185 164 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms